Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4847g00009 ATGTCTGATTCATTCAGTGCCTCCAAGCTTCACCCTCTCAGTACTCCAAACTCCACGCTTAATTCTCCTGCACCTCCCAAAATCATACCTTTCTGCATTTGCACCCACTGCACCAATCTCATCTCTTCGAAACATCATCCTATGGGAGAGGAAGGAGCAGGTAAAAGTAGAGGGTTGCATGGGCAATCTCAGCAAAGCTCGAGATGGAGTCCAACGCCGGCACAGTTACTGGTGCTTGAGGAACTGTACAGACAAGGGACGAAGACGCCGACGGCTGAACAAATACAGCAAATAGCTTCACAGCTACGTCGTTTTGGCAAGATTGAAGGGAAGAACGTGTTCTACTGGTTCCAGAATCACAAAGCAAGAGAGCGCCAGAAACGACGTCGCCGGGAGATGGAGGAAACTGCTTCTGATTCCGCTGAAGACAAAGAACTGTACGATGTCAATGTGAAAAGCTCAGAAGAAAAGCAAGACCCTGCAG 484 0.4876 MSDSFSASKLHPLSTPNSTLNSPAPPKIIPFCICTHCTNLISSKHHPMGEEGAGKSRGLHGQSQQSSRWSPTPAQLLVLEELYRQGTKTPTAEQIQQIASQLRRFGKIEGKNVFYWFQNHKARERQKRRRREMEETASDSAEDKELYDVNVKSSEEKQDPA 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4847g00009 161 MobiDBLite consensus disorder prediction 45 71 - -
Pral4847g00009 161 Gene3D - 59 127 - -
Pral4847g00009 161 CDD homeodomain 68 122 IPR001356 GO:0003677
Pral4847g00009 161 MobiDBLite consensus disorder prediction 128 161 - -
Pral4847g00009 161 MobiDBLite consensus disorder prediction 122 161 - -
Pral4847g00009 161 MobiDBLite consensus disorder prediction 1 21 - -
Pral4847g00009 161 SUPERFAMILY Homeodomain-like 62 130 IPR009057 -
Pral4847g00009 161 Coils Coil 123 143 - -
Pral4847g00009 161 FunFam WUSCHEL-related homeobox 4 66 133 - -
Pral4847g00009 161 Pfam Homeodomain 66 126 IPR001356 GO:0003677
Pral4847g00009 161 ProSiteProfiles 'Homeobox' domain profile. 62 127 IPR001356 GO:0003677
Pral4847g00009 161 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 50 145 IPR044555 GO:0003700|GO:0099402
Pral4847g00009 161 SMART HOX_1 64 131 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4847g00009 Pral-Chr4847 42251 43034 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4847g00009 66 131 Wox Gene Family AT3G18010 83.333 4.67e-35 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral4847g00009 Homeodomain 6.9e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4847g00009 - - gmx:100788830 189.119