Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4846g00087 ATGGATAACGTTCTGGGTCTTCTCAAACTTCGTATCAAAAGAGGTATTTCTCTCGCGATTCGTGATACTCGTAGCAGTGATCCTTATGTCGTTGCCACCTTGGGCGACCAGAAAGTGAAGACTCGTGTCGTGAAGAATAACCGCAACCCTCAGTGGGATGATGAATTGACACTCTCTGTTAAGGATGTCAACTCTCCAGTTCATCTTGCAGTTTTCGACCATGACACATTCACCGGGGATGACACAATGGGGGATGCAGAAATAGACATAAAGCCATATCTTCAGTGTCTGAAGATGAACTTGACCAACCTGCCGAGTGGTTGTATAGTGAAGAGAGTTCAACCAGATGGGAAAAACTACCTTGCTGAGGAGAGCAGCTGCATATGGAAGAATGGAAAAATCACCCAAGAAATGACTCTTGCTTTGAGAAACGTGGAATGTGGCTACGTAGTTGTCGAAATTGAGTGGAAGGAAATTCCAGGTTGCAAGGGCTTATCTGGGATTGAGATCTAA 513 0.4483 MDNVLGLLKLRIKRGISLAIRDTRSSDPYVVATLGDQKVKTRVVKNNRNPQWDDELTLSVKDVNSPVHLAVFDHDTFTGDDTMGDAEIDIKPYLQCLKMNLTNLPSGCIVKRVQPDGKNYLAEESSCIWKNGKITQEMTLALRNVECGYVVVEIEWKEIPGCKGLSGIEI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4846g00087 170 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Pral4846g00087 170 CDD C2_ArfGAP 5 148 - -
Pral4846g00087 170 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 163 IPR044562 -
Pral4846g00087 170 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 100 IPR035892 -
Pral4846g00087 170 Pfam C2 domain 7 92 IPR000008 -
Pral4846g00087 170 SMART C2_3c 7 102 IPR000008 -
Pral4846g00087 170 Gene3D C2 domain 2 160 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4846g00087 Pral-Chr4846 638116 640465 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4846g00087 38 165 C2H2 Transcription Factor Family AT1G70790 59.231 4.06e-53 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4846g00087 - - qsa:O6P43_025854 256.529