Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4846g00060 ATGGAGAGGGATTTCTTGGGCCTAAGCTCAAAAGAACCATTAGCTACGGTGAAAGAGGAGATTAACAATGATGGATGCAGAGAAGCAGGCTTCACTCAGGGTTCAGTTGTACAATGGCCCTTCTCCAACAAAGTCTCTGCTCTCCCCCATTTGATGTCTTTTAAGGTTTCTCAAGACGACAAGACCAAGAAGATGGGATCTGATCCCCTCACATCTGCTGGATTTATGGCTATCTCAAATCCGGATGCATTTGACGCTGCCCAAAAACGCTCTGCTGCTGAAAGCCAGAAACCTTTCAATCACGATGTGCAAAGTGGTTTTCATTTTTCCCTGACTCCGTATCCTGTACCAAATGATGTGCATTCACTGAATCGACCTCAAGATGTGAAGATCTTTCCAGCTCCCAATCAAGCAATTTCTGTTTCCATGGGACATCCTTTCTTGAAGAACCATTTCACCACTGTGGGTCAGAATATGGCTGGTAATAATGTGAAGCAACAGCTACTTGGGGGTATACCTGTTACTTTGCCTCATCTGGTACCCACCATTGGTTCTGTTGCTGCAATGACTGAATCATGTTCGAAGCCATCTGCACCTCCCAGTCAACTCACCATTTTCTATGCTGGTACTGTGAATGTTTTTGATGATATCTCCCCTGAGAAGGCACAAGCTATCATGCTGTTGGCTGCGAATGGGTTACCTGTGACTTCTAACAAGGCACAGCTGAATGTTCAGGCCCCAAACTCAAAGTTGACTTCAGATGAAGGTGTCCCTGTGAGTCAACCCTTAAATGCATTGCCTTGCCCTGGTCTTTCCAGTCCTCTATCTGTGTCTTCACATACGGGTGCACAGTCAAGGAGTGGCTCAACTAGCACCGATGAGCTTCTGGCAGCCAAAACAACTGGAGTCACCACGACTCCTGTTAGCAAAGCGGAGCCTCCAAAAAAAGTCAATGCAACTGCTATGTTGCCTTCTGCTGTGCCACAGGCTCGTAAAGCATCATTGGCACGATTTTTGGAGAAGCGCAAAGAAAGGGTGATGAATGCTGCCGCACCATATAACCCAAGCAAGAAATCCGAGGATGTTGCTAATTTCTCTGCAACTACTTCTGCTGGTTCTAATATTCTATCAGCCAAGCAAGCATAG 1146 0.4625 MERDFLGLSSKEPLATVKEEINNDGCREAGFTQGSVVQWPFSNKVSALPHLMSFKVSQDDKTKKMGSDPLTSAGFMAISNPDAFDAAQKRSAAESQKPFNHDVQSGFHFSLTPYPVPNDVHSLNRPQDVKIFPAPNQAISVSMGHPFLKNHFTTVGQNMAGNNVKQQLLGGIPVTLPHLVPTIGSVAAMTESCSKPSAPPSQLTIFYAGTVNVFDDISPEKAQAIMLLAANGLPVTSNKAQLNVQAPNSKLTSDEGVPVSQPLNALPCPGLSSPLSVSSHTGAQSRSGSTSTDELLAAKTTGVTTTPVSKAEPPKKVNATAMLPSAVPQARKASLARFLEKRKERVMNAAAPYNPSKKSEDVANFSATTSAGSNILSAKQA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4846g00060 381 SMART tify_2 196 231 IPR010399 -
Pral4846g00060 381 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 106 360 IPR040390 -
Pral4846g00060 381 MobiDBLite consensus disorder prediction 246 265 - -
Pral4846g00060 381 Pfam Jas motif 328 353 IPR018467 -
Pral4846g00060 381 MobiDBLite consensus disorder prediction 271 293 - -
Pral4846g00060 381 ProSiteProfiles Tify domain profile. 196 231 IPR010399 -
Pral4846g00060 381 MobiDBLite consensus disorder prediction 270 293 - -
Pral4846g00060 381 Pfam tify domain 198 230 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4846g00060 Pral-Chr4846 404747 408474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4846g00060 37 359 Tify Gene Family AT3G17860 36.578 2.56e-39 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral4846g00060 tify 6.7e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4846g00060 K13464 - qsa:O6P43_032516 491.115