Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4846g00056 ATGTCAATGCTCTCTTCTCACTTTCCTTCTCTGCTTCTTCTTCTTCCTCCTCTTCTGCTACTCATATCCTTCGCAACCCCAACGTCTTCCTCCTCCTCCTCCACCCAGGCTTTCGTCTATAGCAGTTGCTCTCAGGCTAAGTTCATGCCGGGCTCTGCCTATGGGTCTGCCGTCAGCTCCCTTCTCACTTCCATCGTCAACGGCGCCATGATCTCCTCCTACAACAACCTCACCGTCCCTTCCTCCTCCACACAAAACACCCCCATCTACGGCCTTTTCCAGTGTCGCGGTGACCTTGTCGCTATCGAATGCTCCCGCTGTGTTGCCCAGGCTGTCTCCCAGCTTGGCACCATCTGCCCCGACTCCACAGGCGGCGCCTTGCAGCTCGACGGTTGTTTCGTTATGTATGATGATTCCGAGTTCTTGGGCGTCGAGGACAAGACTTTGGTCGTTAAGAAATGTGGGCCTTCCACTGCGTTTACTTCGGATGGGTTGACTCGAAGAGATGCTGTGCTGTCATATTTGGAGACGTCCGATGGGGTGTACAAGGCATTTAGAACGACTAGCTTGGGGAATTTGCAGGGTATAGCGCAGTGCGTAGGGGATTTGAGTGCGACCGATTGTCAGGATTGCCTCTCAAATGCGATCGGACGGCTAAGAGAAGAGTGTGGGCCCGCTCAGTGGGGTCGGGTAGGCTTGGCCAAGTGCTATGCGTGCTACTCCGAAGGTGGAGATTACTCGCCCGATGAAAACGGTAAGCGTAAAAGTAAGAACAGTGATGGACTTCAGAAGACGCAGACAATAATAGTTGGCGTTGTAGCAGTGACGGCTGTGCTCACCCCATTCATTTCATCCTTCACCAAGGGGGGAACTAGAAGAGAAAATCCTGCGCATAACAAACCCCCTCCCCCAATAGTTCAGCTTGATTTACGATCAATTTGTCGGCCGGATTCTGGTGTAGGCCCAACTGGGCATCCCAGTGACAGTCAATCGAAACCGCAATCGTGTTCATCGACATGTGAGGGAGGGGCAAGTGATGACAATAGAAACCTTGTATGTATGAGTCACTTGTACTGCCCTTAA 1083 0.5235 MSMLSSHFPSLLLLLPPLLLLISFATPTSSSSSSTQAFVYSSCSQAKFMPGSAYGSAVSSLLTSIVNGAMISSYNNLTVPSSSTQNTPIYGLFQCRGDLVAIECSRCVAQAVSQLGTICPDSTGGALQLDGCFVMYDDSEFLGVEDKTLVVKKCGPSTAFTSDGLTRRDAVLSYLETSDGVYKAFRTTSLGNLQGIAQCVGDLSATDCQDCLSNAIGRLREECGPAQWGRVGLAKCYACYSEGGDYSPDENGKRKSKNSDGLQKTQTIIVGVVAVTAVLTPFISSFTKGGTRRENPAHNKPPPPIVQLDLRSICRPDSGVGPTGHPSDSQSKPQSCSSTCEGGASDDNRNLVCMSHLYCP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4846g00056 360 ProSiteProfiles Gnk2-homologous domain profile. 36 141 IPR002902 -
Pral4846g00056 360 MobiDBLite consensus disorder prediction 316 343 - -
Pral4846g00056 360 MobiDBLite consensus disorder prediction 323 343 - -
Pral4846g00056 360 ProSiteProfiles Gnk2-homologous domain profile. 142 245 IPR002902 -
Pral4846g00056 360 MobiDBLite consensus disorder prediction 288 307 - -
Pral4846g00056 360 FunFam cysteine-rich repeat secretory protein 3 35 141 - -
Pral4846g00056 360 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 286 - -
Pral4846g00056 360 Pfam Salt stress response/antifungal 43 138 IPR002902 -
Pral4846g00056 360 Pfam Salt stress response/antifungal 183 241 IPR002902 -
Pral4846g00056 360 Gene3D - 161 243 IPR038408 -
Pral4846g00056 360 Gene3D - 34 141 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4846g00056 Pral-Chr4846 380208 381737 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4846g00056 4 231 Pollen Coat Proteome AT4G20670 25.403 4.37e-12 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4846g00056 - - gmx:100808107 320.472