Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4846g00049 ATGGCGGATGCTGATGTTGCCCCAGGACAGCCAAAGAAGAGAACGTTCAAGAAGTTCAGCTTCAGAGGCGTTGATTTGGACGCTCTTCTGGACATGTCAACCGATGAGCTTGTCAAGCTCTTCCATGCCCGAGCCCGCAGAAGGTTTCAGAGAGGGCTGAAGAGGAAGCCTATGGCCTTGATTAAGAAGCTGCGCAAAGCGAAAAGGGAGGCTCCACCCGGTGAAAAGCCAGAGCCAGTTCGCACCCACCTCAGGAACATGATTATTGTGCCCGAGATGATTGGGAGCATAATTGGAGTGTACAATGGCAAGACTTTCAACCAGGTTGAAATCAAACCTGAGATGATTGGCCATTACTTGGCTGAATTCTCAATTTCATACAAGCCTGTCAAGCACGGTAGACCTGGTATTGGTGCCACCCACTCATCAAGGTTCATTCCTCTCAAGTGA 450 0.4978 MADADVAPGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFHARARRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4846g00049 149 Hamap 30S ribosomal protein S19 [rpsS]. 45 138 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pral4846g00049 149 Pfam Ribosomal protein S19 47 132 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pral4846g00049 149 ProSitePatterns Ribosomal protein S19 signature. 102 126 IPR020934 GO:0003723
Pral4846g00049 149 NCBIfam 30S ribosomal protein S19 16 149 IPR005713 GO:0003735|GO:0006412|GO:0015935
Pral4846g00049 149 PRINTS Ribosomal protein S19 family signature 82 101 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pral4846g00049 149 PRINTS Ribosomal protein S19 family signature 102 114 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pral4846g00049 149 PRINTS Ribosomal protein S19 family signature 114 129 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pral4846g00049 149 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 9 149 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pral4846g00049 149 FunFam 40S ribosomal protein S15 6 149 - -
Pral4846g00049 149 SUPERFAMILY Ribosomal protein S19 53 133 IPR023575 GO:0003735|GO:0005840|GO:0006412
Pral4846g00049 149 PIRSF RPS19p_RPS19a_RPS15e_RPS19o 6 149 IPR002222 GO:0003735|GO:0005840|GO:0006412
Pral4846g00049 149 Gene3D 30s Ribosomal Protein S19; Chain A 7 149 IPR023575 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4846g00049 Pral-Chr4846 295983 297524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4846g00049 1 149 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 87.333 4.91e-91 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4846g00049 K02958 - nnu:104612419 294.664