Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4846g00037 ATGTCGTCGGAAAGTTCTCCCACGTCGGCGGCTGAGCCCCACGCGCCTCTCCTTCGTTCCCGCCAGGGTTCCTCTGATGCCCCCAGGACTCCTACCCTCGCGCTCCTTCTCGGCCGCGCCGTCGGCCGTCGGGGACCCTCCATGCTGGTGCGGGAGACTGCGGCTCGCGAACTGGAGGAGCGGAGGGCTGATTGGGGCTACTCCAGGCCTGTTGTGGTTCTCGACATCACGTGGAATATGGCCTTTGTTGTGGTGTCGGTTGTGATGCTTCTTTTGACGACCGACGAGAAGCCTAACACGCCGATCCGGCTCTGGATCTGTGGGTACGCCGCGCAGTTAGTTCATGTGGTGCTTGTGTGGCTCGAGTATAGGAGGAGGACTGCGAGGATTTCGCGGTTGCGGAGGGCTCAGGAAGGGGATATTGAAGCTCGTAATACCGACGATATTAACGACAGCGAGGACGATGAAACTGGAGATGGGAGTTCATTGAATTCGTCTCGCGCTGGGTTCGTGAAACGATGTGAATCAGTGAATACCATGGTTTCATTCCTTTGGTGGATAGTTGGCTTTTATTGGGTAATCTCAGGTGGCGAGACTCTTCTGCAACATGCTCCACGTTTGTATTGGTTGGCTGTTGTTTTTCTGGCATTTGATGTCTTTTTTGCCATCTTTTGTGTTGTTTTGGCCTGCTTGATTGGCATCGCCCTCTGTTGTTGTTTGCCATGCATCATTGCTATTCTCTATGCAGTTGCTGGACAGGAAGGTGCATCAGAAGCAGATCTTAGCTTACTCCCGAAATATAGGTTTCGCATGTTAAACAATGAGGAAAAGCCTACTGGTGGAGCAGGATCAATGGTTCCTTTAGAAACGACTAGTGGGTACCTGGCAAATGAAAGAGTACTTCTACCTGAAGATGCGGAATGCTGTATATGTCTCACTTCATACGAGGATGGAGTAGAACTCAACGCTCTACCCTGCAACCATCATTTCCATTCCACATGCATTGTGAAATGGTTGAAAATGAATGCAACTTGTCCTCTCTGCAAGTACAATATTCTTAAGGGAAATGACCAGGTGTGA 1080 0.5093 MSSESSPTSAAEPHAPLLRSRQGSSDAPRTPTLALLLGRAVGRRGPSMLVRETAARELEERRADWGYSRPVVVLDITWNMAFVVVSVVMLLLTTDEKPNTPIRLWICGYAAQCXVHVVLVWLEYRRRTARISRLRRAQEGDIEARNTDDINDSEDDETGDGSSLNSSRAGFVKRCESVNTMVSFLWWIVGFYWVISGGETLLQHAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAILYAVAGQEGASEADLSLLPKYRFRMLNNEEKPTGGAGSMVPLETTSGYLANERVLLPEDAECCICLTSYEDGVELNALPCNHHFHSTCIVKWLKMNATCPLCKYNILKGNDQV 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4846g00037 360 FunFam E3 ubiquitin protein ligase RIE1 289 357 - -
Pral4846g00037 360 SUPERFAMILY RING/U-box 298 354 - -
Pral4846g00037 360 ProSiteProfiles Zinc finger RING-type profile. 309 350 IPR001841 -
Pral4846g00037 360 SMART ring_2 309 349 IPR001841 -
Pral4846g00037 360 Pfam Ring finger domain 308 350 IPR001841 -
Pral4846g00037 360 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 358 IPR013083 -
Pral4846g00037 360 PANTHER TARGET OF ERK KINASE MPK-1 40 356 - -
Pral4846g00037 360 MobiDBLite consensus disorder prediction 1 30 - -
Pral4846g00037 360 CDD RING-H2_PA-TM-RING 308 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4846g00037 Pral-Chr4846 235509 240188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4846g00037 1 359 C3H Transcription Factor Family AT1G68070 68.245 0.0 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4846g00037 - K13148 qsa:O6P43_025918 522.702