Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4846g00021 ATGGTTTCAAGATCTTACTCAAATCTATTGGACCTAGCCTCTGGTGATTCTCCATCGTTTGGGTTAATAAACCGCGGGATGCCCAGGATTATGACAGTGGCTGGCTTCATTTCTGAGGTTGATGACGACCCAGTGGAGAGTGTGAACTCTGATCCCTCCTCGTCGTCGGTCCACCGCGAACGGATCATAATAGTTGCGAACCAGCTTCCAATCAGGGCTCAGAGGAAGCCAGATGGTTGTAGTAGCAGTAGTAGTACTAGGAATTGGTTGTTCCAGTGGGATGATAATTCACTACTTCTTCAGTTGAAAGATGGATTGGGTGATGATGATATTGATGTTATTTATGTTGGGTGTCTCAAGGAAGAAATCCACCCAAATGAACAAGATGAGGTCTCACAATTTCTCCTGGAAAATTTCAGATGCGTCCCTACTTTTCTCCCTTCTGATCTGTTTTCAAGATACTATCATGGGTTTTGCAAGCAGCAGCTATGGCCTTTGTTTCACTACATGCTGCCTCTGTCACCAGAACTCGGTGGTAGATTCAACAGGTCACTCTGGCAGGCTTATGTCTCTGTGAATAAGATTTTTGCTGATCGAATTATGGAAGTGATTAACCCAGAAGATGATTATGTTTGGATCCATGATTATCATCTCATGGTGTTGCCTACATTCTTGAGGAAGAGATTTAACAGAGTGAAACTTGGGTTCTTCCTCCATAGCCCATTCCCTTCTTCAGAAATTTACAAGACATTGCCCATTAGAGAAGAACTACTGAGAGCTCTTTTGAATTCAGATTTGATAGGTTTCCACACATTTGATTATGCACGGCATTTCTTGTCCTGTTGTAGCCGGATGCTTGGCCTTAGCTATGAATCAAAGCGGGGTTATATTGGGCTTGAGTATTATGGTAGGACTGTTAGCATAAAAATTCTTCCTGTTGGTATCCACATGGGTCAGCTTCAACAAGTGTTAAGCTTTACTAAGACAGAAGAGAAAGTTGCTGAGCTCATTAAGCAATTTGCAGGTCGAGGAAGGACATTGATGCTTGGAGTTGATGACATGGATATCTTCAAGGGAATAAGTTTAAAGCTTTTGGCAATGGAACAGCTTCTTATTCAACATCCAGAGTGGCAAGGGAAGGTTGTATTGGTCCAAATTGCTAACCCGGCCCGGGGGAAGGGGAAAGATGTGAAGGAAGTGCAAGCTGAGACGAAGGCAACAGTTAAAAGGATTAACGAAACATTTGGGAAACCTGGGTATGATCCTGTCATTCTGATTGAGGAGCCACTCAAGTTCTATGAGAAAGTTGCATACTATTCTGTTGCTGAGTGTTGTCTGGTCACTGCAGTTAGGGACGGAATGAATCTCATACCTTACGAATACATAGTCAGTCGTCAAGGAAATGATAAATTGGACAAAGTTTTGGGACTATCTTCCTCTCCTAAAAAGAGCATGTTGGTCGTCTCTGAGTTCATAGGATGTTCCCCATCTTTAAGTGGAGCAATCAGGGTGAACCCATGGAATATTGATGCAGTAGCAGATGCAATGGACTCTGCCCTGGAGATGCCTGATTCAGAGAAAGAGCTTAGGCATGAGAAGCATTATAGATATGTTAGCACCCATGATGTGGGGTACTGGGCTCGAAGCTTCTTGCAGGATCTGGAAAGGACTTGTGGTGATCATGTCCGGCGAAGGTGGTGGGGAATTGGTTTTGGATTGGGTTTTAGAGTCGTAGCACTTGATCCAAACTTCAGGAAGCTCTCAATGGAGCACATAGTTTCAGCCTACAGACGAACAAAAACTCGGGCGATCCTTCTAGATTATGATGGTACACTAATGCCTCAAGCTTCCATTGATAAGAGTCCGACAAGTAAAACCATTGAAATTCTTAGTAGCTTGTGCAGAGACAAGAACAACATGATGTTTCTCGTTAGTGCTAGAAGCCGAAAAACACTTGCTGAGTGGTTTTCTCCTTGTGAGAATCTGGGAATTGCAGCTGAGCATGGTTACTTTCTAAGGTTGAAGCGTGATGCAGAATGGGAAACATGCGGACCTGCAACAGACTGTAGCTGGAAACAGATTGCTGAGCCTGTGATGAAGCTTTATACTGAAACAACTGATGGATCCACTATTGAAGATAAAGAGACCGCACTTGTGTGGTGTTATGAGGATGCAGATCCAGATTTCGGGTCATGCCAAGCCAAGGAACTTCTTGATCATCTTGAAAGTGTGCTTGCAAATGAACCTGTCACTGTCAAGAGTGGCCAGAACATTGTAGAGGTTAAACCACAGGGGGTAAGCAAAGGGATTGTGGTCAAGCGCTTGCTCTCAACCATGCAAGAAAATGAAATATCACCTGATTTTGTGTTGTGCATCGGAGATGATAGGTCTGATGAAGACATGTTCGAGGTAATCTCCAGTTCCTTGGCTGGGCCTACCCTGGCACCAAAGGCTGAGGTATTTGCGTGCACGGTTGGCCGGAAGCCGAGCAAAGCCAAGTATTATCTGGATGATACAGCTGAAATAGTGAGATTGATGCAGGGACTGGCCTGCGTCTCAGAACAAACAGTTAAAAGAAAGGATGGTGAATGA 2592 0.441 MVSRSYSNLLDLASGDSPSFGLINRGMPRIMTVAGFISEVDDDPVESVNSDPSSSSVHRERIIIVANQLPIRAQRKPDGCSSSSSTRNWLFQWDDNSLLLQLKDGLGDDDIDVIYVGCLKEEIHPNEQDEVSQFLLENFRCVPTFLPSDLFSRYYHGFCKQQLWPLFHYMLPLSPELGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDYVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQQVLSFTKTEEKVAELIKQFAGRGRTLMLGVDDMDIFKGISLKLLAMEQLLIQHPEWQGKVVLVQIANPARGKGKDVKEVQAETKATVKRINETFGKPGYDPVILIEEPLKFYEKVAYYSVAECCLVTAVRDGMNLIPYEYIVSRQGNDKLDKVLGLSSSPKKSMLVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMPDSEKELRHEKHYRYVSTHDVGYWARSFLQDLERTCGDHVRRRWWGIGFGLGFRVVALDPNFRKLSMEHIVSAYRRTKTRAILLDYDGTLMPQASIDKSPTSKTIEILSSLCRDKNNMMFLVSARSRKTLAEWFSPCENLGIAAEHGYFLRLKRDAEWETCGPATDCSWKQIAEPVMKLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGIVVKRLLSTMQENEISPDFVLCIGDDRSDEDMFEVISSSLAGPTLAPKAEVFACTVGRKPSKAKYYLDDTAEIVRLMQGLACVSEQTVKRKDGE 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4846g00021 863 Gene3D - 734 862 IPR023214 -
Pral4846g00021 863 Gene3D - 601 733 IPR023214 -
Pral4846g00021 863 SUPERFAMILY HAD-like 602 849 IPR036412 -
Pral4846g00021 863 FunFam Alpha,alpha-trehalose-phosphate synthase 323 539 - -
Pral4846g00021 863 NCBIfam trehalose-phosphatase 600 849 IPR003337 GO:0003824|GO:0005992
Pral4846g00021 863 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 601 718 - -
Pral4846g00021 863 FunFam Trehalose-6-phosphate synthase 10 732 860 - -
Pral4846g00021 863 FunFam Trehalose-6-phosphate synthase 2 685 764 - -
Pral4846g00021 863 Gene3D Glycogen Phosphorylase B; 53 322 - -
Pral4846g00021 863 CDD HAD_TPP 603 844 - -
Pral4846g00021 863 Gene3D Glycogen Phosphorylase B; 323 539 - -
Pral4846g00021 863 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 557 - -
Pral4846g00021 863 CDD GT20_TPS 61 555 IPR001830 GO:0003824|GO:0005992
Pral4846g00021 863 Pfam Glycosyltransferase family 20 61 555 IPR001830 GO:0003824|GO:0005992
Pral4846g00021 863 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 54 321 - -
Pral4846g00021 863 NCBIfam HAD-IIB family hydrolase 604 805 IPR006379 -
Pral4846g00021 863 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 28 850 IPR001830 GO:0003824|GO:0005992
Pral4846g00021 863 Pfam Trehalose-phosphatase 605 839 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4846g00021 Pral-Chr4846 117167 121424 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4846g00021 1 855 Trehalose Biosynthesis Gene Families AT1G68020 80.765 0.0 1459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4846g00021 K16055 - cit:102609352 1493.4