Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4846g00020 ATGGAAGCTGCCATTAATGGTGAAAACGAAGGAGAGCCAAAGGTGGTGGTGGACAGAAATGATCATACAGGAGACAAAGACACTGATGAGCAACTTCGTCTCAAGAAGATGATTGCAAGCCATCCTTTGTATGGCATTCTGATCCAGTCTCACTTCAACTGTTTGAAGGTGGGATTAGGTGAAACTGCAGAATTTGACACAGCAAAAGATGCAGTGAAGCAGTCAGTGAATTCCAAGCCCAGATCCCACCACACCACTAGTCCCAGTTCTTCAGAGCTTGATCACTTCATGGAAGCATATTGCGTGGCACTGAGCAAGCTGAAGGAAGCCATAGAGGAACCAACCAGAGAAACAAAGGCTTTCATAAGTGGAATGTACATAGATCTCAAGGACCTCACTGACAACAATAATATCCAACCGAATGACCCCCAACAAGAATCTTTATGA 447 0.4452 MEAAINGENEGEPKVVVDRNDHTGDKDTDEQLRLKKMIASHPLYGILIQSHFNCLKVGLGETAEFDTAKDAVKQSVNSKPRSHHTTSPSSSELDHFMEAYCVALSKLKEAIEEPTRETKAFISGMYIDLKDLTDNNNIQPNDPQQESL 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4846g00020 148 SMART KNOX1_2 32 75 IPR005540 GO:0003677|GO:0005634
Pral4846g00020 148 Pfam KNOX1 domain 34 58 IPR005540 GO:0003677|GO:0005634
Pral4846g00020 148 PANTHER HOMEOBOX PROTEIN KNOTTED-1-LIKE 6 ISOFORM X1 1 137 - -
Pral4846g00020 148 SMART KNOX2_2 80 134 IPR005541 GO:0003677|GO:0005634
Pral4846g00020 148 MobiDBLite consensus disorder prediction 1 27 - -
Pral4846g00020 148 Pfam KNOX2 domain 91 133 IPR005541 GO:0003677|GO:0005634
Pral4846g00020 148 MobiDBLite consensus disorder prediction 72 91 - -
Pral4846g00020 148 MobiDBLite consensus disorder prediction 12 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4846g00020 Pral-Chr4846 104775 106040 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4846g00020 34 122 Homeobox Transcription Factor Family AT4G08150 36.264 5.71e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4846g00020 - - pcin:129321621 140.584