Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4846g00001 ATGGTGAAACCTCACTTGAGTTTCGGGCTTTCTTTTCTATGTCGTATCCTTTTGATTCTTTCCATGGTCTTGTTGGCCAAGTCTCAGGACGCAACGGTTATGACCATTCTCAAGAACTCGATCAAGGGGTCGAGTTCACTCCAATGGTCCGACCCGGATGTCTGCAAATGGTCTCACGTTCAATGCAATTCTGGGAAACGGGTCACGGCAATTCAGATTGGGAACTTGAACCTGCAAGGGTCATTGCCAAAAGAACTCTCCCAGCTCACAGAATTACAGCGTTTCGAGTGCCAATCAAACAGTCTTTCAGGGGCATTTCCGTCATTAGCCAGTTCCCTGCAACACCTTTACATTTCAGACAACGGCTTCACCTCTATGCCTTCAGATTTCTTCAAGGGCATGTCGACGTTACAAGAAGTAAGAATCGACAATAACCCTTTTCCTCCGTGGCAAATTCCAGACATACTCAAGGAGTGCGTAGCATTACAAACATTATCGGCGCAAAATGTTTCTTTTTTCGGAGAAATTCCAGATTTTTTCGGCAAAGATGGTCCATTCCCAGGTTTGACTAAATTGTCCCTGTGTTTCAATCAACTCGTAGGTGGGTTACCTTCGAGCTTCTCAGGTAGTTCGATAGAGCTACTGTGGGTGAATGGACAAAAGAGTACTTCTAAACTTAATGGCACGCTTGCGGTGTTACAGAACATGACTTCATTGAAGCAGATTTGGGTTCATGGTAATTCCTTCACTGGTCCTATCCCAGACCTGTCGCACCATGATCAATTGTGGGATGTGAGTTTGAGGGATAACCAGTTAACTGGTGTTGTTCCGTCGTCTCTTATGTCTCTTCCTAGCTTGCAAGTCGTGAATTTAACTAATAATTATCTTCAAGGACCGATGCCTGCGTTTAAATCAGGAGTACGTGCCGATATGCAGGGAATAAATCAGTTTTGCACGACCAAGCCTGGTCAGCCATGTAGTTCTTTGGTGAATGCTTTATTATCTGTGGTTGAACCGTTGGGTTATCCCTTGAAGTTTGCTCAAAATTGGAAGGGCAATGATCCTTGTGCTGGTAACTGGATAGGGATCGTTTGCGCAGGTAGAAATATTACGGTTGTGAATTTTCAGAGCATGGGCCTTTCTGGGACTATTTCTCCTAATTTTTCCAGCCTCACATCTGTAAAAAGGTTGCTTCTTGCTAACAATAATCTCACTGGCACTATACCTCGGGAGCTTACAAGCATGCCTCTTTTGCAAGAGCTGGATATCTCGAATAATCATATATATGGTCAGGTGCCAAAATTTCGGGAAGATGTGATTCTTAAATCAGGTGGGAATCCGGATATTGGAAAGGATAGGCCCACTCCTGCGGGACCCGACTCGGATAATACTGCAGGTACTGGTAAGAAACATCATTCAACAGTCATTATTATCATTGTTGTGGTGGGGCTTGTTGTTTTACTTGGTGTGGTAGTTGGGGGGCTCGTTTGGTTCAATAGAAAAAGGAAGCGTTCAAGCAAAACACAAGGCCAGAATGGCGTAGTGATACATCCTCGGCATTCTGGAGACAGAAATCACTTGAAAATCAGTGTTTGTGCTGGAACCGGCGCTAATGGAGGAGGAACTGATGGACGGATTACCAGTACTAGTAATGCAGCTGGTGATATTCATGCCGTGGAAGCTGGTGGTATGGTAATTTCAATTCAAGTTTTAAGAGAAGCTACCAACAACTTCAGTAGAGAGAACATACTGGGGAAGGGCGGTTTTGGCACCGTGTACAAAGGAGAATTGCATGATGGGACAAAGATTGCGGTGAAAAGAATGGAATCTGGAATTGAGGGTGAGAAGGGGCTGAGTGAATTCAAAGCTGAAATCACTGTACTCACTATTCGTCATAAGCATTTGGTTGCTCTCATGGGGTATTGCTTGGATGGAAATGAGAGGCTTCTTGTGTATGAGTACATGCCTCAAGGAACCCTGAGCAGGCATTTGTTCAACTGGAAAGATGAAGGGTTAAAGCCACTGGAATGGACAAGAAGACTTATCATTGCCTTGGATGTTGCTAGAGGAGTTGAATATCTTCATGGTTTGGCCCAACAAACTTTCATTCACAGGGATCTTAAACCATCAAACATCCTGCTTGGTGATGATATGCGAGCTAAAGTGTCTGATTTTGGATTGGTTCGTCTTGCTCCAGAAGGAAAAGCCTCATTTGAGACCAGACTTGCTGGAACTTTTGGCTATTTGGCACCAGAATATGCAGTAACTGGACGAGTGACGACGAAGGTTGATGTATATAGTTTCGGAGTGATTCTTATGGAGATGATAACTGGTCGGAAAGCACTCGATGACAGCCAATCTGAGGAGAATGTCCACCTTGTGACATGGTTTCGAAGAATGACGCTGGCGAAGGACACATTCCGAAAGGCCATTGATCCAGAAATAGATGTGAATGAAACTCTACCCAGTATCAACACTGTTGCGGAGCTGGCCGGCCATTGCTGCGCAAGGGAGCCCCACCAGAGGCCGGACATGGGCCATGCCGTGAACATGCTGGCGCCTCTCGTGGAGGTCTGGAAGCCTGCAGAATCAAGTTCTGATGACATTGGTGGGATTGACCTTGACATGGACCTACCACAAGCTCTTAAAAAATGGCAGGCGTTTGAAGGAATGAGCTCCACCGCCATGCCCATGGATGCTACTTCTTCATCCGTGGTTTCCAGTGCAGATAGTACTCAGTCTAGCATACCCCCAAGGCCATTTGGACTTGGAGCTTCTTTCACTTCCTCAGATGGAAGATGA 2802 0.4547 MVKPHLSFGLSFLCRILLILSMVLLAKSQDATVMTILKNSIKGSSSLQWSDPDVCKWSHVQCNSGKRVTAIQIGNLNLQGSLPKELSQLTELQRFECQSNSLSGAFPSLASSLQHLYISDNGFTSMPSDFFKGMSTLQEVRIDNNPFPPWQIPDILKECVALQTLSAQNVSFFGEIPDFFGKDGPFPGLTKLSLCFNQLVGGLPSSFSGSSIELLWVNGQKSTSKLNGTLAVLQNMTSLKQIWVHGNSFTGPIPDLSHHDQLWDVSLRDNQLTGVVPSSLMSLPSLQVVNLTNNYLQGPMPAFKSGVRADMQGINQFCTTKPGQPCSSLVNALLSVVEPLGYPLKFAQNWKGNDPCAGNWIGIVCAGRNITVVNFQSMGLSGTISPNFSSLTSVKRLLLANNNLTGTIPRELTSMPLLQELDISNNHIYGQVPKFREDVILKSGGNPDIGKDRPTPAGPDSDNTAGTGKKHHSTVIIIIVVVGLVVLLGVVVGGLVWFNRKRKRSSKTQGQNGVVIHPRHSGDRNHLKISVCAGTGANGGGTDGRITSTSNAAGDIHAVEAGGMVISIQVLREATNNFSRENILGKGGFGTVYKGELHDGTKIAVKRMESGIEGEKGLSEFKAEITVLTKXRHKHLVALMGYCLDGNERLLVYEYMPQGTLSRHLFNWKDEGLKPLEWTRRLIIALDVARGVEYLHGLAQQTFIHRDLKPSNILLGDDMRAKVSDFGLVRLAPEGKASFETRLAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMEMITGRKALDDSQSEENVHLVTWFRRMTLAKDTFRKAIDPEIDVNEXTLPSINTVAELAGHCCAREPHQRPDMGHAVNMLAPLVEVWKPAESSSDDIGGIDLDMDLPQALKKWQAFEGMSSTAMPMDATSSSVVSSADSTQSSIPPRPFGLGASFTSSDGR 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4846g00001 935 PANTHER OSJNBA0070M12.3 PROTEIN 13 935 - -
Pral4846g00001 935 SUPERFAMILY Protein kinase-like (PK-like) 561 863 IPR011009 -
Pral4846g00001 935 MobiDBLite consensus disorder prediction 441 467 - -
Pral4846g00001 935 CDD STKc_IRAK 584 857 - -
Pral4846g00001 935 ProSiteProfiles Protein kinase domain profile. 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4846g00001 935 FunFam receptor protein kinase TMK1 541 655 - -
Pral4846g00001 935 Gene3D Transferase(Phosphotransferase) domain 1 656 871 - -
Pral4846g00001 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 703 715 IPR008271 GO:0004672|GO:0006468
Pral4846g00001 935 MobiDBLite consensus disorder prediction 898 935 - -
Pral4846g00001 935 FunFam Leucine-rich repeat receptor-like kinase 328 452 - -
Pral4846g00001 935 Gene3D Ribonuclease Inhibitor 328 453 IPR032675 -
Pral4846g00001 935 Gene3D Ribonuclease Inhibitor 27 323 IPR032675 -
Pral4846g00001 935 SUPERFAMILY L domain-like 34 435 - -
Pral4846g00001 935 ProSitePatterns Protein kinases ATP-binding region signature. 584 606 IPR017441 GO:0005524
Pral4846g00001 935 Pfam Protein kinase domain 579 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4846g00001 935 Gene3D Phosphorylase Kinase; domain 1 542 655 - -
Pral4846g00001 935 Pfam Leucine rich repeat 387 428 IPR001611 GO:0005515
Pral4846g00001 935 SMART serkin_6 578 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4846g00001 935 MobiDBLite consensus disorder prediction 898 921 - -
Pral4846g00001 935 Pfam Leucine rich repeat N-terminal domain 331 365 IPR013210 -
Pral4846g00001 935 Pfam Leucine rich repeat N-terminal domain 29 63 IPR013210 -
Pral4846g00001 935 FunFam receptor protein kinase TMK1 656 873 - -
Pral4846g00001 935 FunFam Receptor-like kinase TMK4 28 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4846g00001 Pral-Chr4846 9809 13292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4846g00001 68 860 Receptor kinase-like Gene Family AT5G07280 30.060 3.81e-80 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Pral4846g00001 Pkinase 2.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4846g00001 K00924 - gmx:100776064 1214.52