Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4845g00004 ATGGTGATTGCCTTTGCGTGTGCAGCTTTAGGTGTCATTATTGCACTATCTGTCATCGGTTTCTTAGTATGCCGGCGAAGGACCAGAGATTCAGGGGACGCGACAGCTGAGAAGTCATTAGATTTGTGCCGTAACTTTTCCATCACAGAGATCAGCGCTGCTACCGACAACTTCGATGGTAATTCAATAATTGGTCAGGGAGGATTTGGTATGGTCTATAAAGGACACATTAACAACGGGAAGACATCAACACCCGTAGCCATCAAACGGCTCAAAGCAGAATCAGAACAAGGGGCCGATGAGTTCGAGACAGAGATCAAGATGCTTTCCCAGTTTCGCCATCCTCACTTGGTTGATCTCATCGGCTACTGCAAAGATGACAAGGAGATGATCCTGGTCTATGAATTCATGGCCCGCGGCACCCTCAGAGATCATCTTAACGAACCTGCTAACCAGCCACTTTCATGGAAGCAAAGGCTTGAGATATGCATCGAAGCAGCAAATGCACTGCTCTATCTTCATACCAACACTGGTGAGAACAAGCGAAGCGTGATCCACCGCGATGTGAAGAGTGCAAACATTTTGTTAGACGAGAATTGGAAAGCAAAGGTTTCAGATTTCGGATTGTCCAGGATTGGGCCGAATGGCTTGTCCAGGTCACATGTTACCACACTTGTCAAAGGCAGCGTCGGGTATATAGACCCACAATACTGCGAGAGTCAGCAGCTGACCACAAAATCTGATGTTTACTCTTTTGGTGTGGTTTTACTTGAGGCTTTGTGCGGAAAGCCGCATATATTTCGAAACGAGGAGAAGCAGCAGGTAACCCTGGTGGAATGGTTTAAGAAATGCTATGAGAAAGGAGAGATCGGCGACGTGGTTGATCCATTTTTGAAGGGGGTCATAACGCCCCAGTGCTTGAACAAGTTCGTTCAAATAGCATTGGCTTGTCTGCGTGATAATGGGAAGCTGCGGCCACCCATGAGAGATGTTGTGAGGGGCTTAGGGTCTGCGTTGAAGATGCAGGGGAGCATGGAGGTTGAGATCCTGAGAGAGGGTGGAGAGGCAAACAAAGAGGACAAACCAACCGTGACCCAATTCAGAAAAGATGAAGAAAGTGGAGTACAGTTCTCGACTTCAAGTGGATCCACCACGACTGTGTCCACGTGGAGGAGTAAGGTCACCGTCGCCAGTAGTGAGGAGGAGTAA 1209 0.4814 MVIAFACAALGVIIALSVIGFLVCRRRTRDSGDATAEKSLDLCRNFSITEISAATDNFDGNSIIGQGGFGMVYKGHINNGKTSTPVAIKRLKAESEQGADEFETEIKMLSQFRHPHLVDLIGYCKDDKEMILVYEFMARGTLRDHLNEPANQPLSWKQRLEICIEAANALLYLHTNTGENKRSVIHRDVKSANILLDENWKAKVSDFGLSRIGPNGLSRSHVTTLVKGSVGYIDPQYCESQQLTTKSDVYSFGVVLLEALCGKPHIFRNEEKQQVTLVEWFKKCYEKGEIGDVVDPFLKGVITPQCLNKFVQIALACLRDNGKLRPPMRDVVRGLGSALKMQGSMEVEILREGGEANKEDKPTVTQFRKDEESGVQFSTSSGSTTTVSTWRSKVTVASSEEE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4845g00004 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 184 196 IPR008271 GO:0004672|GO:0006468
Pral4845g00004 402 FunFam receptor-like protein kinase FERONIA 24 136 - -
Pral4845g00004 402 SUPERFAMILY Protein kinase-like (PK-like) 42 333 IPR011009 -
Pral4845g00004 402 Gene3D Phosphorylase Kinase; domain 1 29 136 - -
Pral4845g00004 402 SMART serkin_6 58 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4845g00004 402 ProSiteProfiles Protein kinase domain profile. 58 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4845g00004 402 PANTHER OS07G0166700 PROTEIN 43 342 IPR045272 GO:0004714|GO:0006468
Pral4845g00004 402 Pfam Protein tyrosine and serine/threonine kinase 62 333 IPR001245 GO:0004672|GO:0006468
Pral4845g00004 402 ProSitePatterns Protein kinases ATP-binding region signature. 64 89 IPR017441 GO:0005524
Pral4845g00004 402 MobiDBLite consensus disorder prediction 354 368 - -
Pral4845g00004 402 Gene3D Transferase(Phosphotransferase) domain 1 137 356 - -
Pral4845g00004 402 FunFam Receptor-like protein kinase FERONIA 137 356 - -
Pral4845g00004 402 MobiDBLite consensus disorder prediction 369 395 - -
Pral4845g00004 402 CDD STKc_IRAK 64 335 - -
Pral4845g00004 402 MobiDBLite consensus disorder prediction 354 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4845g00004 Pral-Chr4845 34252 35796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4845g00004 27 346 Receptor kinase-like Gene Family AT3G51550 55.937 3.77e-119 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pral4845g00004 PK_Tyr_Ser-Thr 8.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4845g00004 - - pcin:129298244 582.793