LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4845g00003	ATGGTGTTGAGCTTGAGAAAGATTGAAGAACCAAGCGTCTTCTTCTCTCTGGTCATCTTCTTGTTTCACTCTCAACATCTCTTCACCATTCCGGTCACTTCCTTCGCTCCTGCAGAGAGGTTTTCCATTAACTGTGGCTCCCCATCAGGCAATTCATACACTACTTCAGGTGGCAGAAAATGGCAACCAGATGACAATTCCAAACTAGTTTCCCTCGGTCAAAACAGCCGGACCTCAATCGCTCAGGTTTCTCCTCCACCGGAGCAAGTTCCTTATGCCACGGCTCGCCTGTCTCGTTCTGAATTCACCTACTCCTTTGAGGTCCCCGAAGGCCAAAAGTTTGTTCGCCTCTTCTTTTACCCAGCTGCATATGACAATTTTGATCGTTCCAATGCTCTCTTCTCCGTTAAAGCAGGCCACCACACCCTTCTTAAGGACTTCAACGCTTCACTCACTGCTGATAACGACGATGATCCTGGGCAAAAAGTGTTCAGAGAGTACTGTGTTAACGTGGAACCTGGTCACAGGCTGAACATCACGTTCACTCCAAGTAGCACCAACCATCCAGACGCCTACGCGTTTATTAATGGGATTGAGGTTGTGGCCATACCGACCAATCTTTATTACAAAAAAGCTGGTGACCCAGCGTTGCAGCTGGTTAATGACGAGAATAATCGGATTCGAGTTGATAACAACACTGCTCTGGAGATGGTGTACAGAATCAATGTCGGAAAGGATGAGATTCCAGCTGAGCAAGACACTACTGGTTTGCTTCGAGACTGGCATGGCGTAACTGGCTATGGCTATGCGGTGATGCAAACCTTGCAAGATCTAGAAGATAATGATTTTGATGCAGAGCCGAGGTACCCAAAAGATCTTCTCAAAGACGCAGCACCTAAGGATGTCTATTTAACTGCAAAGACCTCTAAAGATACAATGACTTGGGAGTTTAAAGTGGACTCCATGTTTGCTTATATGATCAGACTGCACTTCTGTGAGTTGGACCCGAGAGTCCAGAAGGGAGAAAGAGTTTTTCAGATACTCATAGCTGACACTCTGGCTGAGCCTCAGATCGATGTGCTTGGTTTGCGGGAAGACAGCCGAGTTCCTCTTTATAGGGACTATGCTGTTTCGTTGAAGCAAGGAAACTTGAAGAGTAGTCAGAACATTTCAATCAAGTTGCAGAGGCTCTCAAAAAGCAAGTACGATGTCCTATTGAATGGAATTGAAGTTTTCAAGATCAGTGATCCTAGTGACAAACCCAACCCAGGCCCAACATCTTCACCAACCAAACCATCAAAACTCTCGAAGAAAAAAACAGAAACTCCCATGGTGATTGCCTCAGCGTGTGCAGCTTTAGGTGTTATTATTGCACTATCTGTCATCTGTTTCTTTGTATGTCGGCGAAGGACCAGAAATTCAGGGGACGGGACAGCTGAGAAATCATTAGATTTGTGCCGTAACTTTTCCATCGCAGAGATCAGAGCTGCTACCGACAACTTCGATGGTAATTCAATAATTGGTCAGGGAGGATTTGGTGTAGTCTATAAAGGACACATTAACAACGGGAAGACATCAACACCCGTAGCCATCAAACGGCTTAAAGCAGAATCAGACCAAGGGGCCGATGAGTTCGAGACAGAGATCAAGATGCTGTCCCAGTTTCGCCATCCTTACTTGGTTGATCTTATTGGCTACTGCAACGATGACAAGGAGATGATCCTGGTTTATGAATTCATGGCCCGCGGCACCCTCAGAGATCATCTTAACGAACCGGCTAACCAGCCACTTTCATGGAAGCAAAGGCTGGAGATCTGCATCGGAGCAGCAAATGCACTGCTCTATCTTCACACCAACACTGGTGAGAACAAGCGAAGTGTGATCCACCGTGATGTGAAGAGTGCAAACATTTTGTTAGACGAGAATTGGAAAGCAAAGGTTTCAGATTTCGGATTGTCCAGGATTGGGCCGAATGGCTTGTCCAGGTCACATGTGACCACACTCGTCAAAGGCAGCGTCGGGTACATAGACCCAGAATACTACGAGAGTCAACAGCTGACCACAAAATCTGATGTTTACTCTTTTGGTGTGGTTTTACTTGAGGCTTTGTGCGGAAAGCCACATATATTTCGAAACGAGGAGAAGCACCAGGTACACCTGGTGGAGTGGGTTAAGAAATGCTATGAAAAAGGGGAGATCGGCGAGGTCGTTGATCCATTTTTGAAGGGGGTCATAACACCCCAGTGTTTGAACAGGTTCGTTCAAATAGCATTGGCTTGTCTGCGTGATAATGGGAAGCTTCGGCCGCCCATGAGAGATGTTGTGAGGGGCTTAGAGTCCACGTTGAGGATGCAGGGGAGCATGGAGGTTGAGATCCTGAGAGATGATGGAAAGGCAAACAAAGAGAACAGACCAACAGTGACCCAATTTAGAAAAGATGAAGAAAGTGGAGTACAGTTCTCGACTTCAAGTGGATCCACCACAACTGAATCCAAGTGCAGCAGTAAGGTCACCGTCACCAGTAGTGAGGAGGAGCAAGCCTTGGTTCCTACAGTGTTCTCTGAGCTTGCGCATCCAACAGCACGCTAA	2589	0.467	MVLSLRKIEEPSVFFSLVIFLFHSQHLFTIPVTSFAPAERFSINCGSPSGNSYTTSGGRKWQPDDNSKLVSLGQNSRTSIAQVSPPPEQVPYATARLSRSEFTYSFEVPEGQKFVRLFFYPAAYDNFDRSNALFSVKAGHHTLLKDFNASLTADNDDDPGQKVFREYCVNVEPGHRLNITFTPSSTNHPDAYAFINGIEVVAIPTNLYYKKAGDPALQLVNDENNRIRVDNNTALEMVYRINVGKDEIPAEQDTTGLLRDWHGVTGYGYAVMQTLQDLEDNDFDAEPRYPKDLLKDAAPKDVYLTAKTSKDTMTWEFKVDSMFAYMIRLHFCELDPRVQKGERVFQILIADTLAEPQIDVLGLREDSRVPLYRDYAVSLKQGNLKSSQNISIKLQRLSKSKYDVLLNGIEVFKISDPSDKPNPGPTSSPTKPSKLSKKKTETPMVIASACAALGVIIALSVICFFVCRRRTRNSGDGTAEKSLDLCRNFSIAEIRAATDNFDGNSIIGQGGFGVVYKGHINNGKTSTPVAIKRLKAESDQGADEFETEIKMLSQFRHPYLVDLIGYCNDDKEMILVYEFMARGTLRDHLNEPANQPLSWKQRLEICIGAANALLYLHTNTGENKRSVIHRDVKSANILLDENWKAKVSDFGLSRIGPNGLSRSHVTTLVKGSVGYIDPEYYESQQLTTKSDVYSFGVVLLEALCGKPHIFRNEEKHQVHLVEWVKKCYEKGEIGEVVDPFLKGVITPQCLNRFVQIALACLRDNGKLRPPMRDVVRGLESTLRMQGSMEVEILRDDGKANKENRPTVTQFRKDEESGVQFSTSSGSTTTESKCSSKVTVTSSEEEQALVPTVFSELAHPTAR	862

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4845g00003	862	Pfam	Protein tyrosine and serine/threonine kinase	505	776	IPR001245	GO:0004672\|GO:0006468
	Pral4845g00003	862	SUPERFAMILY	Protein kinase-like (PK-like)	485	776	IPR011009	-
	Pral4845g00003	862	ProSitePatterns	Protein kinases ATP-binding region signature.	507	532	IPR017441	GO:0005524
	Pral4845g00003	862	ProSiteProfiles	Protein kinase domain profile.	501	782	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4845g00003	862	FunFam	FERONIA receptor-like kinase	40	204	-	-
	Pral4845g00003	862	Gene3D	-	40	203	-	-
	Pral4845g00003	862	Gene3D	-	233	415	-	-
	Pral4845g00003	862	SMART	serkin_6	501	782	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4845g00003	862	Pfam	Malectin-like domain	43	414	IPR024788	-
	Pral4845g00003	862	Gene3D	Phosphorylase Kinase; domain 1	473	579	-	-
	Pral4845g00003	862	MobiDBLite	consensus disorder prediction	809	844	-	-
	Pral4845g00003	862	PANTHER	OS03G0124300 PROTEIN-RELATED	15	478	IPR046957	GO:0004672
	Pral4845g00003	862	MobiDBLite	consensus disorder prediction	416	438	-	-
	Pral4845g00003	862	Gene3D	Transferase(Phosphotransferase) domain 1	580	807	-	-
	Pral4845g00003	862	FunFam	Receptor-like protein kinase FERONIA	580	800	-	-
	Pral4845g00003	862	MobiDBLite	consensus disorder prediction	812	844	-	-
	Pral4845g00003	862	FunFam	receptor-like protein kinase FERONIA	467	579	-	-
	Pral4845g00003	862	CDD	STKc_IRAK	507	779	-	-
	Pral4845g00003	862	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	627	639	IPR008271	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4845g00003	Pral-Chr4845	20748	23428	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4845g00003	30	862	Receptor kinase-like Gene Family	AT3G51550	41.379	0.0	619

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_CrRLK1L-1	Pral4845g00003		Malectin_like	1.9e-41	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4845g00003	-		-	pcin:129298244	1202.96