Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4843g00102 ATGGACGATGATGCCTTGAACATGCGCAATTGGGGTTATTATGAACCCTTCAAGGGGGGGCATCTGGGTCTCCAGCTCATGTCTAGTATGACAGAACGAGACACCAAGCCATTTATGCCAGGCCGTGATCCTACCATGCTAGTCAATCCAAATGGAAGCTTCCACCCTCGGGACTGTGTTGTTTCAGAAGCCTCAATTCCAATTAACTATGTTAGAGACAGTTGGATCAGCCAGAGAGACAGGTTTCTCAATATGCTGCCCACAAATCCTAATTATGCCGTTCTTCCGGAAACATCAGGAGCTCCTTCTTTGCAAATTATACAGCCACCTGAGACATCAAGAGATGATAGGGTGAACCAAGTTGAAGAGCCTCCTGTTAAAAAGGAAGTCGGCCAATTGAAGAAAAGGCAGAATGGGGGTGCTCCAAAGACTCCAAAAGCGAAAAAACCAAGGAAGCCAAAGGATAATAGCAATGCTTTGGTTCAACGTGAGAAGCCAGCAAGGAAGGCTATGGAGGTTGTGATAAATGGAATCGATATGGACATTTCTGGTCTACCCATTCCTGTTTGCTCGTGTACTGGGGCTCCTCAGCAGTGTTATCGATGGGGCTGTGGTGGTTGGCAATCAGCTTGTTGTACCACAAATGTGTCAATGTATCCCTTGCCAATGAGCACTAAAAGGCGCGGTGCAAGGATAGCTGGACGGAAAATGAGTCAAGGTGCTTTTAAGAAGGTTTTGGAAAAACTTGCAGCTGAAGGATATAATTTTGCTAATCCCATTGATCTGAGGACTCACTGGGCTAGGCATGGCACCAACAAGTTTGTCACTATCAGATGA 837 0.4612 MDDDALNMRNWGYYEPFKGGHLGLQLMSSMTERDTKPFMPGRDPTMLVNPNGSFHPRDCVVSEASIPINYVRDSWISQRDRFLNMLPTNPNYAVLPETSGAPSLQIIQPPETSRDDRVNQVEEPPVKKEVGQLKKRQNGGAPKTPKAKKPRKPKDNSNALVQREKPARKAMEVVINGIDMDISGLPIPVCSCTGAPQQCYRWGCGGWQSACCTTNVSMYPLPMSTKRRGARIAGRKMSQGAFKKVLEKLAAEGYNFANPIDLRTHWARHGTNKFVTIR 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4843g00102 278 SMART GAGA_bind_2 1 278 IPR010409 -
Pral4843g00102 278 MobiDBLite consensus disorder prediction 94 165 - -
Pral4843g00102 278 PANTHER - 1 278 IPR010409 -
Pral4843g00102 278 Pfam GAGA binding protein-like family 1 278 IPR010409 -
Pral4843g00102 278 MobiDBLite consensus disorder prediction 151 165 - -
Pral4843g00102 278 MobiDBLite consensus disorder prediction 115 134 - -
Pral4843g00102 278 MobiDBLite consensus disorder prediction 94 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4843g00102 Pral-Chr4843 482059 484130 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4843g00102 1 278 BBR or BPC Transcription factor family AT2G01930 57.912 6.61e-110 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Pral4843g00102 GAGA_bind 2.8e-112 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4843g00102 - - qsu:111986496 484.567