Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4843g00044 ATGGAGAATCACACCGCCAACAACACCAAAGCAGTTTCAGGAGGAGCCAAACCCATCAATGACAGCGAAGAGCGTTCCAATTTGAATGAAGAGGAGCACACAGAAGAAGTGGATGTAGATGAGAATGGAGGTGCGGATGAAGAAGACGGAGAGAGGACTGGATCTGGCTCCGTCCGGTCTCCTCATCGCCCCCCTTCCAGAACCCCTTTCACTAATCTCAGTCAGGTCGATGCTGACCTCGCCCTTGCTCGAACCCTTCAGGAGCAGGAAAGGGCATACATGATGCTGAGAATGAACAACGAAGGAAGTGATTATGGAAGTTGGGAAGCTGGCAACTATTTGCATGATGACGTTGATGATTTTGAGGATATACGTGATGGTACTGATGACGATGAAGACAATGACCTTGATGATGATGATGACGATGATGACAATAATGATGATGATGATGATGAAGATGCGTTTGATGTCCATGCTCATGGTAGTTCTGGTGAAATTGATAATACCAGCATTGAATTTGACCCTGATGCGTTCTCAAGTGATGAAGCCTATGCAAGAGCATTACAAGAGGCTGAAGAAAGGGAAATGGCGGCTAGACTATTCGCAATGGCTGGGATAAATGATCGGGAAGCTGAGGACACAGAAGACCATGGTGCTAATTCTCAGGATGCGTGGGAGGATGTTGATCCTGATGAACTTTCATATGAGGAACTCCTGGCATTGGGTGAAGTTGTTGGAACTGAGAGCAGAGGTCTTTCTACTGATACTATAGCCTCTTTGCCTTCGGTCAACTACAAGATCGGAAGTGATCAGCATGGAAGTAACGATTCATGTGTCATATGCCGGGTAGATTATGAGGATGGTGAGTCCTTGACTGCACTTTCATGCAAACATTTGTACCATCCTGAGTGCATTAACAACTGGTTGAAAATAAACAAGGTTTGCCCTGTTTGCAGTGCTGAGGTGTCAGCTTCCGGAAGCAACTTGTAG 990 0.4616 MENHTANNTKAVSGGAKPINDSEERSNLNEEEHTEEVDVDENGGADEEDGERTGSGSVRSPHRPPSRTPFTNLSQVDADLALARTLQEQERAYMMLRMNNEGSDYGSWEAGNYLHDDVDDFEDIRDGTDDDEDNDLDDDDDDDDNNDDDDDEDAFDVHAHGSSGEIDNTSIEFDPDAFSSDEAYARALQEAEEREMAARLFAMAGINDREAEDTEDHGANSQDAWEDVDPDELSYEELLALGEVVGTESRGLSTDTIASLPSVNYKIGSDQHGSNDSCVICRVDYEDGESLTALSCKHLYHPECINNWLKINKVCPVCSAEVSASGSNL 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4843g00044 329 MobiDBLite consensus disorder prediction 119 173 - -
Pral4843g00044 329 ProSiteProfiles Zinc finger RING-type profile. 278 319 IPR001841 -
Pral4843g00044 329 MobiDBLite consensus disorder prediction 1 15 - -
Pral4843g00044 329 MobiDBLite consensus disorder prediction 210 229 - -
Pral4843g00044 329 MobiDBLite consensus disorder prediction 210 224 - -
Pral4843g00044 329 MobiDBLite consensus disorder prediction 33 47 - -
Pral4843g00044 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 325 IPR013083 -
Pral4843g00044 329 FunFam E3 ubiquitin ligase BIG BROTHER-related 244 325 - -
Pral4843g00044 329 SUPERFAMILY RING/U-box 269 323 - -
Pral4843g00044 329 MobiDBLite consensus disorder prediction 59 75 - -
Pral4843g00044 329 MobiDBLite consensus disorder prediction 1 75 - -
Pral4843g00044 329 MobiDBLite consensus disorder prediction 122 154 - -
Pral4843g00044 329 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 25 327 IPR043312 -
Pral4843g00044 329 SMART ring_2 278 318 IPR001841 -
Pral4843g00044 329 Pfam Ring finger domain 276 318 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4843g00044 Pral-Chr4843 224922 229406 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4843g00044 56 222 C3H Transcription Factor Family AT3G19910 52.695 1.60e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4843g00044 K19045 - gmx:100787418 434.491