Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4843g00040 ATGCACCAAGATTCAGGGTTACTAGGCACCAAGATTCAGGGTTACTACTTAGTTGGAACTTTGACCGAAAAGAAGATCGACTTAAATGAGGAAGACCGTAAGCATTTGCTAACGGTGCTTCTTCCATACTTAAGGCAGCTACATGAAGAACAAATGATCGAGAAGGAGACTGAAGCTAAGAGACAAGGCATCTCACTTTCAGAGCTCCAGGTAGGGCAGGCAGACTGCTCCCATGAAGAGCGTATTTACTGTGACAATTGTAAAACTTCAATTTTTGATTATCACCGAAGCTGTCAAGAATGTTTTTTTGACCTCTGTCTAGTCTGTTGCCGTGAGATTCGCCAAGGAAAATTGGTTGGGGGTGCAGAGCCAGTTGAGTTTGAATTTATCAGTCGGGGGCTGAAGTATATGCATGGTGGAGAGGAGTCAACGTCAAAAAAAATAAATGTTGAGTCAAAAAATGATGATCGTGACTGGTCAAGATCTAGTTTGAAGGTGACAAGTGATGGTAGCATCCCTTGTCCAAGGGTTGATGGTGGTTGTGGTCATAGTTATCTTGAACTTCGATGTATATTTCCTGATGACTGGATTTCTGAACTTGTAAAGAAAGCAGAAAATATGGCTAAAGCATATAATCTTGATGATGCAAGACAGACAAGTAACCAGTGTGGTTCATGCTTTGAACTAGATGGTAACAACAATAATGTTGGAAATGAGAACAGGATAAAGGCTGCTTCTCGCGAAGATCCTAGTGACACTGACAACTATATATACTGTCCAAGGGCCATAGATTTAGGACTTAAGGATGTGAAGCATTTTCAGTGGCACTGGAGTAAAGGAGAGCCAGTGATTGTCAGCAATGTGCTTGAATGCACATCTGGTTTAAGCTGGGAACCACTGGTTATGTGGCGTGCTTTCCGTAAGATAAATAATAAAAAGCAAGAAACACATTTGGCAGTGAAGGTCATTGATTGTTTGGACTTGTGTGAGGGAGACATCAATATCCACCAATTCTTTACTGGGTACTCTGAAGGTCGAAAAGATTTTGAAATGGGGCCTCAGTTATTGAAACTGAAAGATTGGCCTCCTTCGAAATTATTTGAGGAACGGTTGCCACGTCATTGTGCTGAGTTCATTTCTTCCCTACCATTCAAGGAATATACAAATCCCTATAATGGTGTTTTAAACCTTGCTTCAATGCTACCAGATGGAGTAATAAAGCCAGATATTGGTCCAAAGACATATATAGCATATGGAATTCCTATGGAGCTTGGGCGGGGAGATTCAGTGACAAAGCTTCATTGTGATATGTCTGATGCAGTAAATGTTCTGACACATACTTTTGAAACGCCCCTTGATGCTGATCTTCTTGCACAAATAAAGTATTTAAAAGGAAAGCACCTTGAACAGGACAGAAAGGAGCTGTATCACGATGGTCAGGGGGAAGAAGCTAATGCTGAAAATGGAAAGATTACAGATCTCGAAAATACCTTGCTTGGATATGATTCTGTTGAGGGAGGTGCTCTCTGGGATATTTTTAGGAGACAGGATGTGCCTAAACTGCAGGAATACCTTAAGAAGCACTTCAGAGAATTCAGGCATGTCAACTGTATTCCTTTGCATCAGGTTGTTCATCCTATCCATGATCAGACCTTTTATTTGACTATGGATCATAAGAGGAAACTGAAGGAGGAATATGGAATTGAACCATGGACATTTATTCAGAAACTGGGAGATGCAGTTTTGATTCCTGCTGGTTGTCCTCACCAAGTCAGAAATCTCAAGTCATGTATCAAGGTTGCTCTCGATTTTGTGTCACCTGAAAGTATAGAGGAGTGTATTCGTTTAACACAGGAATTTCGCACACTTCCCATAAATCACAGGGCTATTGAGGACAAATTGGAGGTCAAAAAAATGCTTATTCATGCAATGGGCAACGTGGTGGGGCAAACATGGGGGAAGGAAGGAACAGAGCTACTTGATCAAAAGAAAGGAAAGAAGAAAGCTAAGGCTAAATTGTAA 2022 0.4105 MHQDSGLLGTKIQGYYLVGTLTEKKIDLNEEDRKHLLTVLLPYLRQLHEEQMIEKETEAKRQGISLSELQVGQADCSHEERIYCDNCKTSIFDYHRSCQECFFDLCLVCCREIRQGKLVGGAEPVEFEFISRGLKYMHGGEESTSKKINVESKNDDRDWSRSSLKVTSDGSIPCPRVDGGCGHSYLELRCIFPDDWISELVKKAENMAKAYNLDDARQTSNQCGSCFELDGNNNNVGNENRIKAASREDPSDTDNYIYCPRAIDLGLKDVKHFQWHWSKGEPVIVSNVLECTSGLSWEPLVMWRAFRKINNKKQETHLAVKVIDCLDLCEGDINIHQFFTGYSEGRKDFEMGPQLLKLKDWPPSKLFEERLPRHCAEFISSLPFKEYTNPYNGVLNLASMLPDGVIKPDIGPKTYIAYGIPMELGRGDSVTKLHCDMSDAVNVLTHTFETPLDADLLAQIKYLKGKHLEQDRKELYHDGQGEEANAENGKITDLENTLLGYDSVEGGALWDIFRRQDVPKLQEYLKKHFREFRHVNCIPLHQVVHPIHDQTFYLTMDHKRKLKEEYGIEPWTFIQKLGDAVLIPAGCPHQVRNLKSCIKVALDFVSPESIEECIRLTQEFRTLPINHRAIEDKLEVKKMLIHAMGNVVGQTWGKEGTELLDQKKGKKKAKAKL 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4843g00040 673 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 32 650 IPR045109 GO:0032454|GO:0033169
Pral4843g00040 673 ProSiteProfiles JmjC domain profile. 390 621 IPR003347 -
Pral4843g00040 673 SMART cupin_9 371 621 IPR003347 -
Pral4843g00040 673 Gene3D Cupin 264 630 - -
Pral4843g00040 673 Pfam JmjC domain, hydroxylase 508 604 IPR003347 -
Pral4843g00040 673 SUPERFAMILY Clavaminate synthase-like 263 642 - -
Pral4843g00040 673 FunFam Transcription factor jumonji domain-containing protein 254 630 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4843g00040 Pral-Chr4843 203096 215874 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Pral4843g00040 JmjC 2.4e-14 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4843g00040 K15601 - csav:115721711 777.319