Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4843g00032 ATGCTCATGCATTCCCACAGTATGGATCCCTATCATCATCCCACCATGACACAACCTAAACCTCTCAACTCTACCCTCTCCTCTCACCCCCTTGCCCTCGCCGGAGACTCCTTCTCCGGCCGGCTCTTCTTCTTGCGAGATGTCCAGGTCTTGGAGATCCTCCTTGCTGCTATGGTCTTCATAGTCATCCATTCCATGAGACAGAGGAAACGCTATGGCTTGCCCGTTTGGCCTGTCTTTGGAATGTTACCTTCCTTGGTGTTCACGGGGCTTAGGACCAACTTGTATGAATGGGTCACCGATGTCCTGAGCCGGCAAAACTGGACGTTTCAATTCAGAGGGCCTTGGTTCAGCAGCCTCAACTGCGTCGTCACGTCTGATCCTCGCAACTTGGAGCATCTTCTCAAGACCAAGTTCCCTCTTTTTCCGAAAGGAAGTTACTTTAGGGACAATCTGAGGGACCTTCTTGGAGAAGGTATTTTCAACGCAGATGATGGGACATGGCAGAGACAGAGGAAAACGGCGAGCATTGAGTTTCATTCTGCAAAATTCAGGAACATGACCACAGAGTCATTGTTTGAGCTAGTCCATTTGAGACTGTTGCCTGTGTTGGAAGCATCGTTTGAGAAATCCACGTCCATTGACTTACAAGACATCCTATTAAGGCTTACGTTTGACAACGTGTGTATGATAGCTTTCGGTGTTGATCCAGGTTGCTTGAGCCTGAACTTGCCGGAAATCCCATTCGCTAAAGCGTTTGAAGATGCAACAGAAGCGACGGTGCTTCGCTTCGTCACGCCAACATGGGTGTGGAAAACCATGAGGTGTCTCAACCTGGGGATGGAGAGAAAGCTGAAGAAGTCGATAAAGAAGGTGGACGAATTCGCAGAGAACGTGATTAAGACAAGGAAAAAGGAGCTGGCTTTGCAGCGTGAGGAGGAGAATACGAGGTCAGACTTGTTGACAATATTCATGGGGCTCAAGGATGAGAAAGGGGAGGCATATTCAGATAAGTTCTTGAGAGATATATGTGTGAACTTCATATTAGCAGGGAGGGACACGTCTTCAGTGGCTCTGAGCTGGTTTTTCTGGTTGCTTCATGAGAATCCCGAGGTGGAGGAGAAGATACTGCAAGAGATTTGCAAGATAGTGAATGAGAGGGAAGAAGATGAAGCAGCGAAGAAGAAGAAGGAGGGACAAGAGTTGAGATTTAGAGCGGAGGAGATTAAGAAGATGGATTATTTGCAGGCTGCTCTTTCTGAGTCACTCAGACTCTACCCTTCCGTCCCTGTGGATCACAAGGAGGTAGTTGAAGACAACACATTCCCAGATGGAACAGAGCTAAAGAAAGGCACCAAAGTCATATACGCAATTTATGCGATGGGGAGAATGGAAGGCATATGGGGAAAAGATTGCAGAGAGTTCAGGCCAGAGAGATGGCTCAGAGATGGCCATTTCATGAGTGAATCCGCTTACAAGTTCACTGCCTTCAATGGTGGTCCTCGTTTGTGCCTAGGCAAAGATTTTGCTTATTACCAGATGAAATATGTCGCTGCCAGCATCATCTATCGCTACCATGTGAGGTTGGCTCACAATCACCCTGTGCTTCCCAAGCTTGCATTAACTATGTACTTGAAGCATGGCTTGAAAGTTAGTCTTGAAAGGAGGGACGCCGCAGAGATTCGGAAACATTTCTCAGATCAGTAA 1707 0.4751 MLMHSHSMDPYHHPTMTQPKPLNSTLSSHPLALAGDSFSGRLFFLRDVQVLEILLAAMVFIVIHSMRQRKRYGLPVWPVFGMLPSLVFTGLRTNLYEWVTDVLSRQNWTFQFRGPWFSSLNCVVTSDPRNLEHLLKTKFPLFPKGSYFRDNLRDLLGEGIFNADDGTWQRQRKTASIEFHSAKFRNMTTESLFELVHLRLLPVLEASFEKSTSIDLQDILLRLTFDNVCMIAFGVDPGCLSLNLPEIPFAKAFEDATEATVLRFVTPTWVWKTMRCLNLGMERKLKKSIKKVDEFAENVIKTRKKELALQREEENTRSDLLTIFMGLKDEKGEAYSDKFLRDICVNFILAGRDTSSVALSWFFWLLHENPEVEEKILQEICKIVNEREEDEAAKKKKEGQELRFRAEEIKKMDYLQAALSESLRLYPSVPVDHKEVVEDNTFPDGTELKKGTKVIYAIYAMGRMEGIWGKDCREFRPERWLRDGHFMSESAYKFTAFNGGPRLCLGKDFAYYQMKYVAASIIYRYHVRLAHNHPVLPKLALTMYLKHGLKVSLERRDAAEIRKHFSDQ 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4843g00032 568 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 497 506 IPR017972 GO:0005506|GO:0016705
Pral4843g00032 568 PANTHER CYTOCHROME P450 63 551 - -
Pral4843g00032 568 Coils Coil 555 568 - -
Pral4843g00032 568 Pfam Cytochrome P450 76 547 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 SUPERFAMILY Cytochrome P450 73 556 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 PRINTS E-class P450 group I signature 339 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 PRINTS E-class P450 group I signature 494 504 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 PRINTS E-class P450 group I signature 504 527 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 PRINTS E-class P450 group I signature 359 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 PRINTS E-class P450 group I signature 416 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 Gene3D Cytochrome P450 70 567 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 FunFam Cytochrome P450 65 559 - -
Pral4843g00032 568 PRINTS P450 superfamily signature 504 515 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 PRINTS P450 superfamily signature 495 504 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 PRINTS P450 superfamily signature 417 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 PRINTS P450 superfamily signature 350 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral4843g00032 568 CDD CYP86A 110 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4843g00032 Pral-Chr4843 171290 174360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4843g00032 39 566 Cytochrome P450 AT5G23190 74.242 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4843g00032 K15402 - gmx:100809503 872.078