Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4843g00015 ATGGGCGAGTCTGGCAAGAAATCAGATCTCGGTTTTGACGCTGCTGTTGCTGGAGTCTCACCATCGAAGTCTGCCATGATTGGAAAGAGAGAAAGTGAAGATGAACCTGAGAAGCAAGTGACTGCAAAGAAGCAGAAGAGAGACTGGGATGCTGAAAATCAAAAGAAGGAAAGTAGTTCAGATGACTCCTTTTTAGATTCTGCAAACTCAGATGAAGATTCTGCTTTGAATGATTCCAACGTAGCCCCTGCTGAAGGTAAGAGTGGGCCCAGTGCTGTACGGAAGAAAGGCGAATCAAGATCAGATACCGGGAGTAGCTCAGTTGATAAAGATGATATAAAAATAGAAGCAACCATAGTGCGTGAGAAATTGCCTAATGCTGGTGAGAAAGAGCCTGCTAAGAAAGTTGATTCAAGCAAACCCTCAGGCTTAGATTCTGACAGCAAAACTAATGAGGATATGGACAATGTAACCACATCATCGAAGAAGTCGCTTGCTACTTCTGCTGCAGGTAATAATAAATCCACTCATAAGTTTGTGTCAAGCAATGACTCATCCCTGGATAGTGGCTTAGATGAGGATGATGTTCAGAAGACACGCGTAACGTCATCATCTAAGAAGCTGCTTGCTTCTGCAGTTGTTCAAAGGGAGGGAATTGGGAAAAATGAGAACCCCTGCTATGGATCAAGAGAAGGATTTGATGAGTGCAATGTTTCAGAAGGAAACGAAGAGATCGAGGAGAAACCTTGTACAACTCAGAAAGATGTGAAAGATGAAGAAATGGTTGATGTTACCTCAATGGGAGCAACTAGAAAGGGAGTTCCTAAAACAGCGTTGACTTTAGAAAAACAAAATGCCACATCGAAAAAGATATTTGTTGGGAACTTATCATTAGAGATGAAAAGGGCCAATTTGGAAAATCTATTTAAGGGTTGTGGAGAAATTGTTGATGTCTCGTTTGGTTTATATCGTGATGGGACTTTTAGAGGCTTTGCTCATGTTGAGTTTGCCACTGAAGAAGCTGCACAGAATGCCCTTATGTTGAATGGGAGTGAGCTGTTAAGACGTTTTGTCAGAATTGAGATAGCCCGTGAAAAGTTTGCATATACCCCTAATAGCAGGAACAACACATTGAAGGGTTTTCAAGCATTCTCTGGAGATGGTGAGCCTACAATGTTAGCTACTTCAAAAGAACAAAATGCCACATCAAAGATGCTATTTGTTGGAAACTTGTCATATAGCGTGGAAAGGGCGGATTTGGAAAATTTATTTAAAGATTGTGGAGAAATTGTTGATATTCGATTTGCTACAGACCGTGAAGGGAGGTTTAAAGGCTTCGCACACGTTTTGTTTGCCACAGAGGCAGCAGCACAAATTGCCCTTATGTTGAACGGGAAAGAACTGTTGAGACGTTCTCTCAGGCTTGATCTAGCTCATGAAAGGGGTGTATATTCCCACAGTAGCAACAACAGGAATGAATCATCCCAGGAGGATAAATCGTTAGGAGGGAATGAGGCTAAAATGCCAGCTGCTCCAAAAGAACAAAATGCCACATCAAAGACAGTATTTGTTGGAAACCTGTCGTATAGCGTGGAAAGGGCTGATTTGGAAAATTTGTTTAAAGATTGTGGAGAAATTATTGATATCCGTTTAGCTACAGATCGTGAAGGGAGGTTTAAAGGATTCGGACATATTGAGTTTGCCACTTATGAAGCGGCACAAACTGCCCTTAAGTTGAATGGAAGCGAACTGTTGAGACAATATATAAGGCTTGATTTGGCTCATGAAAAGATTGTGCATTCTTTCAATAGCGGCATTCATGGGAACACGGAAAACTCTGGAAGTGTTGAGTCTCAAACAGTGTTTGTAAGGGGTTTTGATACATCTTTAAGAGAAGATGAGATAAGGACCAGTCTGGGAGAGCATTTCAGTTCTTGTGGACTAATTTCGAGGATATCAATTGCAAGAGATTATGACACTGGTTCTACTAAGGGGTATGCTTGGGTAGACTTCATGGACATTGATGGCTTAAACAAAGCACTAGAACTTGATGGAACTGAGGTTGGAGGTTATGTATTGTCAGTGGAGAAAAGAAGACCTCGGCGTTATATTCATGATGGTAGAGGTGGTGGTGATCAGTTAGGTGGATGGCGTGGTGGCGATCAATTTGGTGGATGGCGTGGTGGTGATCAATTTGGTGGGTGGCGTGGAGTTGGACAATGGGATCAGGGAAGAGGTTATGGCAGGAGGTGGCATTGA 2259 0.4223 MGESGKKSDLGFDAAVAGVSPSKSAMIGKRESEDEPEKQVTAKKQKRDWDAENQKKESSSDDSFLDSANSDEDSALNDSNVAPAEGKSGPSAVRKKGESRSDTGSSSVDKDDIKIEATIVREKLPNAGEKEPAKKVDSSKPSGLDSDSKTNEDMDNVTTSSKKSLATSAAGNNKSTHKFVSSNDSSLDSGLDEDDVQKTRVTSSSKKLLASAVVQREGIGKNENPCYGSREGFDECNVSEGNEEIEEKPCTTQKDVKDEEMVDVTSMGATRKGVPKTALTLEKQNATSKKIFVGNLSLEMKRANLENLFKGCGEIVDVSFGLYRDGTFRGFAHVEFATEEAAQNALMLNGSELLRRFVRIEIAREKFAYTPNSRNNTLKGFQAFSGDGEPTMLATSKEQNATSKMLFVGNLSYSVERADLENLFKDCGEIVDIRFATDREGRFKGFAHVLFATEAAAQIALMLNGKELLRRSLRLDLAHERGVYSHSSNNRNESSQEDKSLGGNEAKMPAAPKEQNATSKTVFVGNLSYSVERADLENLFKDCGEIIDIRLATDREGRFKGFGHIEFATYEAAQTALKLNGSELLRQYIRLDLAHEKIVHSFNSGIHGNTENSGSVESQTVFVRGFDTSLREDEIRTSLGEHFSSCGLISRISIARDYDTGSTKGYAWVDFMDIDGLNKALELDGTEVGGYVLSVEKRRPRRYIHDGRGGGDQLGGWRGGDQFGGWRGGDQFGGWRGVGQWDQGRGYGRRWH 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4843g00015 752 SUPERFAMILY RNA-binding domain, RBD 281 372 IPR035979 GO:0003676
Pral4843g00015 752 MobiDBLite consensus disorder prediction 484 515 - -
Pral4843g00015 752 MobiDBLite consensus disorder prediction 27 62 - -
Pral4843g00015 752 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 32 374 - -
Pral4843g00015 752 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 619 700 IPR000504 GO:0003723
Pral4843g00015 752 MobiDBLite consensus disorder prediction 91 152 - -
Pral4843g00015 752 Gene3D - 484 601 IPR012677 -
Pral4843g00015 752 Gene3D - 230 373 IPR012677 -
Pral4843g00015 752 Gene3D - 374 483 IPR012677 -
Pral4843g00015 752 MobiDBLite consensus disorder prediction 484 501 - -
Pral4843g00015 752 Gene3D - 607 748 IPR012677 -
Pral4843g00015 752 SUPERFAMILY RNA-binding domain, RBD 615 729 IPR035979 GO:0003676
Pral4843g00015 752 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 289 365 IPR000504 GO:0003723
Pral4843g00015 752 MobiDBLite consensus disorder prediction 153 187 - -
Pral4843g00015 752 MobiDBLite consensus disorder prediction 63 77 - -
Pral4843g00015 752 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 520 596 IPR000504 GO:0003723
Pral4843g00015 752 SUPERFAMILY RNA-binding domain, RBD 512 610 IPR035979 GO:0003676
Pral4843g00015 752 MobiDBLite consensus disorder prediction 1 205 - -
Pral4843g00015 752 SMART rrm1_1 620 696 IPR000504 GO:0003723
Pral4843g00015 752 SMART rrm1_1 290 361 IPR000504 GO:0003723
Pral4843g00015 752 SMART rrm1_1 521 592 IPR000504 GO:0003723
Pral4843g00015 752 SMART rrm1_1 405 476 IPR000504 GO:0003723
Pral4843g00015 752 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 621 693 IPR000504 GO:0003723
Pral4843g00015 752 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 522 589 IPR000504 GO:0003723
Pral4843g00015 752 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 291 357 IPR000504 GO:0003723
Pral4843g00015 752 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 406 473 IPR000504 GO:0003723
Pral4843g00015 752 SUPERFAMILY RNA-binding domain, RBD 397 489 IPR035979 GO:0003676
Pral4843g00015 752 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 404 480 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4843g00015 Pral-Chr4843 62947 83534 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4843g00015 276 702 Eukaryotic Initiation Factors Gene Family AT1G22760 22.851 5.31e-15 77.0