Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4843g00011 ATGGGCGAGTCTGGCAAGAAATCAGATCTCGGTTTTGACGCTGCTGTTGCTGGAGTCTCACCATCGAAGTCTGCCATGATTGGAAAGAGAGAAAGTGAAGATGAACCTGAGAAGCAAGTGACTGCAAAGAAGCAGAAGAGAGACTGGGATGCTGAAAATCAAAAGAAGGAAAGTAGTTCAGATGACTCCTTTTTAGATTCTGCAAACTCAGATGAAGATTCTGCTTTGAATGATGATATAAAAATAGAAGCAACCATAGTGCGTGAGAAATTGCCTAATGCTGGTGAGAAAGAGCCTGCTAAGAAAGTTGATTCAAGCAAACCCTCAGGCTTAGATTCTGACAGCAAAACTAATGAGGATATGGACAATGTAACCACATCATCGAAGAAGTCGCTTGCTACTTCTGCTGCAGGTAATAATAAATCCACTCATAAGTTTGTGTCAAGCAATGACTCATCCCTGGATAGTGGCTTAGATGAGGATGATGTTCAGAAGACACGCGTAACGTCATCATCTAAGAAGCTGCTTGCTTCTGCAGTTGTTCAAAGGGAGGGAATTGGGAAAAATGAGAACCCCTGCTATGGATCAAGAGAAGGATTTGATGAGTGCAATGTTTCAGAAGGAAACGAAGAGATCGAGGAGAAACCTTGTACAACTCAGAAAGATGTGAAAGATGAAGAAATGGTTGATGTTACCTCAATGGGAGCAACTAGAAAGGGAGTTCCTAAAACAGCGTTGACTTTAGAAAAACAAAATGCCACATCGAAAAAGATATTTGTTGGGAACTTATCATTAGAGATGAAAAGGGCCAATTTGGAAAATCTATTTAAGGGTTGTGGAGAAATTGTTGATGTCTCGTTTGGTTTATATCGTGATGGGACTTTTAGAGGCTTTGCTCATGTTGAGTTTGCCACTGAAGAAGCTGCACAGAATGCCCTTATGTTGAATGGGAGTGAGCTGTTAAGACGTTTTGTCAGAATTGAGATAGCCCGTGAAAAGTTTGCATATACCCCTAATAGCAGGAACAACACATTGAAGGGTTTTCAAGCATTCTCTGGAGATGGTGAGCCTACAATGTTAGCTACTTCAAAAGAACAAAATGCCACATCAAAGATGCTATTTGTTGGAAACTTGTCATATAGCGTGGAAAGGGCGGATTTGGAAAATTTATTTAAAGATTGTGGAGAAATTGTTGATATTCGATTTGCTACAGACCGTGAAGGGAGGTTTAAAGGCTTCGCACACGTTTTGTTTGCCACAGAGGCAGCAGCACAAATTGCCCTTATGTTGAACGGGAAAGAACTGTTGAGACGTTCTCTCAGGCTTGATCTAGCTCATGAAAGGGGTGTATATTCCCACAGTAGCAACAACAGGAATGAATCATCCCAGGAGGATAAATCGTTAGGAGGGAATGAGGCTAAAATGCCAGCTGCTCCAAAAGAACAAAATGCCACATCAAAGACAGTATTTGTTGGAAACCTGTCGTATAGCGTGGAAAGGGCTGATTTGGAAAATTTGTTTAAAGATTGTGGAGAAATTATTGATATCCGTTTAGCTACAGATCGTGAAGGGAGGTTTAAAGGATTCGGACATATTGAGTTTGCCACTTATGAAGCGGCACAAACTGCCCTTAAGTTGAATGGAAGCGAACTGTTGAGACAATATATAAGGCTTGATTTGGCTCATGAAAAGATTGTGCATTCTTTCAATAGCGGCATTCATGGGAACACGGAAAACTCTGGAAGTGTTGAGTCTCAAACAGTGTTTGTAAGGGGTTTTGATACATCTTTAAGAGAAGATGAGATAAGGACCAGTCTGGGAGAGCATTTCAGTTCTTGTGGACTAATTTCGAGGATATCAATTGCAAGAGATTATGACACTGGTTCTACTAAGGGGTATGCTTGGGTAGACTTCATGGACATTGATGGCTTAAACAAAGCACTAGAACTTGATGGAACTGAGGTTGGAGGTTATGTATTGTCAGTGGAGAAAAGAAGACCTCGGCGTTATATTCATGATGGTAGAGGTGGTGGTGATCAGTTAGGTGGATGGCGTGGTGGCGATCAATTTGGTGGATGGCGTGGTGGTGATCAATTTGGTGGGTGGCGTGGAGTTGGACAATGGGATCAGGGAAGAGGTTATGGCAGGAGGTGGCATTGA 2160 0.4185 MGESGKKSDLGFDAAVAGVSPSKSAMIGKRESEDEPEKQVTAKKQKRDWDAENQKKESSSDDSFLDSANSDEDSALNDDIKIEATIVREKLPNAGEKEPAKKVDSSKPSGLDSDSKTNEDMDNVTTSSKKSLATSAAGNNKSTHKFVSSNDSSLDSGLDEDDVQKTRVTSSSKKLLASAVVQREGIGKNENPCYGSREGFDECNVSEGNEEIEEKPCTTQKDVKDEEMVDVTSMGATRKGVPKTALTLEKQNATSKKIFVGNLSLEMKRANLENLFKGCGEIVDVSFGLYRDGTFRGFAHVEFATEEAAQNALMLNGSELLRRFVRIEIAREKFAYTPNSRNNTLKGFQAFSGDGEPTMLATSKEQNATSKMLFVGNLSYSVERADLENLFKDCGEIVDIRFATDREGRFKGFAHVLFATEAAAQIALMLNGKELLRRSLRLDLAHERGVYSHSSNNRNESSQEDKSLGGNEAKMPAAPKEQNATSKTVFVGNLSYSVERADLENLFKDCGEIIDIRLATDREGRFKGFGHIEFATYEAAQTALKLNGSELLRQYIRLDLAHEKIVHSFNSGIHGNTENSGSVESQTVFVRGFDTSLREDEIRTSLGEHFSSCGLISRISIARDYDTGSTKGYAWVDFMDIDGLNKALELDGTEVGGYVLSVEKRRPRRYIHDGRGGGDQLGGWRGGDQFGGWRGGDQFGGWRGVGQWDQGRGYGRRWH 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4843g00011 719 MobiDBLite consensus disorder prediction 1 170 - -
Pral4843g00011 719 MobiDBLite consensus disorder prediction 451 482 - -
Pral4843g00011 719 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 371 447 IPR000504 GO:0003723
Pral4843g00011 719 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 373 440 IPR000504 GO:0003723
Pral4843g00011 719 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 258 324 IPR000504 GO:0003723
Pral4843g00011 719 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 489 556 IPR000504 GO:0003723
Pral4843g00011 719 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 588 660 IPR000504 GO:0003723
Pral4843g00011 719 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 256 332 IPR000504 GO:0003723
Pral4843g00011 719 MobiDBLite consensus disorder prediction 27 62 - -
Pral4843g00011 719 SUPERFAMILY RNA-binding domain, RBD 248 339 IPR035979 GO:0003676
Pral4843g00011 719 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 487 563 IPR000504 GO:0003723
Pral4843g00011 719 SUPERFAMILY RNA-binding domain, RBD 479 577 IPR035979 GO:0003676
Pral4843g00011 719 SUPERFAMILY RNA-binding domain, RBD 582 696 IPR035979 GO:0003676
Pral4843g00011 719 Gene3D - 573 715 IPR012677 -
Pral4843g00011 719 SUPERFAMILY RNA-binding domain, RBD 364 456 IPR035979 GO:0003676
Pral4843g00011 719 MobiDBLite consensus disorder prediction 74 119 - -
Pral4843g00011 719 SMART rrm1_1 372 443 IPR000504 GO:0003723
Pral4843g00011 719 SMART rrm1_1 587 663 IPR000504 GO:0003723
Pral4843g00011 719 SMART rrm1_1 257 328 IPR000504 GO:0003723
Pral4843g00011 719 SMART rrm1_1 488 559 IPR000504 GO:0003723
Pral4843g00011 719 Gene3D - 352 450 IPR012677 -
Pral4843g00011 719 Gene3D - 451 568 IPR012677 -
Pral4843g00011 719 Gene3D - 197 342 IPR012677 -
Pral4843g00011 719 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 586 667 IPR000504 GO:0003723
Pral4843g00011 719 MobiDBLite consensus disorder prediction 451 468 - -
Pral4843g00011 719 MobiDBLite consensus disorder prediction 120 154 - -
Pral4843g00011 719 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 32 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4843g00011 Pral-Chr4843 62947 83536 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4843g00011 243 669 Eukaryotic Initiation Factors Gene Family AT1G22760 22.851 3.79e-15 77.4