Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4843g00009 ATGTACTTGAGGAGAATACAATGTCGAGATTGGAGGTGGGGCGTTTCACTTCAGCCACTCAAATACTTAATTAGGCCAAGACGCTATGGTCATGCATGCTTTCAATCTCTGTGCCCTAAGACTACCGTGGAAGAATGTGTTTCACATGATATTATAGTAAAGAGACGTCTATTGGAATCTTTTTTATCTAGGGTCGGATCATCTAATAGGAGTTGTACTGATCTGAACAGAAGGCCTAGTTCATATTTGAGAAGTACTCAGTTACGCTTCTACAGTTCTGAAAGTGATGGAAGGAATGCTAGTGAGGGCAACCATGTAAACGCAAATGATGGAGCTCGCTGTGATAAGCAAAAGAACTGGCAAGATAAGTTTGGGGAAGATGCCAAACTCTGTAATGCTCATGCTCAACTTGGGAAACATGATCAAGAGGAGTGGCTCAAGAATGAGAAGATTGCCATTGAAAATAAAAAGAGAGAATCACCCTTTTTAACCAGAAAGGATAAGTTCAAAAATGAGTTTCTGAGAAGGGTTGTTCCTTGGGAGAAAATAAACATTTCATGGGACACATTTCCTTACTATATTCATGAGAATACCAAAAATCTTCTCTTGGAATGTGCCGCTTCCCATTTGAGACATAATAAGGTTGCTTCTTCTTATGGGACTCGCCTCTCATCTTCAAGTGGGAGAATATTGCTTCAGAGCGTGCCTGGTACTGAGCTATATCGAGAGAGATTAGTTAGAGCACTTGCACAAGATCTAAAAGTCCCCCTACTGGTGCTTGATAGCAATATCCTTGCTCCTTATTATATCGATGATGACATATCTTCATCAGAATGCGAGTCTGATGATGATAATGCAGAATCTGGGGAGGAGGCTTCTCTGGAGTCCGAGAATGAAGATGATAACAACGAAGAAGAGTGGACTAGTAGTGCTGAGGCAAAGTCAGATGCCAGTGATAACGAAGAACATGATGCGATAGCAACTGCTGAAGCAGCCCTAAAGAAGGTGAAAGCAGCTGTTCAGAAACTTGTTCCTTACAACGTTGAAGACTTTGAAAAGAGGTCATCTGAAGAGTCAGAAAATTCTGAGTCAACCAAATCTGAAGTTGTGAAGCCTTCTGACCCATCTGGATGCCAATTGAAGAAAGGTGACCGTGTGAAATACATTGGGCCATCTGTTCAAATGAAAGTCAACAATAGCAGGATCATACTGGGGAAGATAATGACATCTGATGGCCCAACTAATGCTTACACTAACATCCATGGCAGATCTTTGTCCAATGGTCAACGGGGAGAGGTATATGAGGTGGAGGGGGATCAAGCTGCTGTCATCATGGACATTAGCGAAGATGATACAAAGGAGGGAGAGTTGGAGAAATCTAATGAACATACGGATTCACGACTTTGTTGGATACATGTTAAGGACATTGAGCATGACCCTGATGCTCAAGTACAGGATTGCTACATAGCTATGGAGGCTCTATGCGAGGTTTTGGATTCCAAACAACCTCTTATTGTCTATTTTCCAGACAGTACACAGTGGTTTCATAAATCAATCCTGAAGTCAAACAGAAAAGAGTTCTTTCGTAAGGTTCAAGAAATGTTTGACAAGTTGTCTGGTCCAGTTGTGTTGATTTGTGGACAAAACAAAATTCAATCAGGGTCAAAAGAGAAAAAGCAATTTACAATGATACTTCCAAACTTTGGACGCGTTGGTAAGCTGCCTCTTTCTCTGAAACACTTGACTGAGGGACTTGGAGCAACAAAGAGATCGGATGATGATGAACTCCACAAGCTTTTCACTAATGTTTTGTGCATACATCCGCCTAAAGAGGACGATCAGCTTGGAACTTTTAAAAAACAACTTGAGGAAGACAGGAAAATTGTGATTTCACGTAGTAGTTTGAATGAATTACACAAGGTTCTTGAAGAACATGAGCTATCATGCTTGGACCTCTTGCAAGTAAATACTGATGGTGTTATTCTGACAAAGCAAAAGGCTGAAAAGGTGGTGGGATGGGCAAAAAATAATTACTTGTCATCTTGCCCACTTCCATATGTTAAAGGAGAACGATTGTGCTTGCCTCGTGAAAGTCTTGAAATTGCAATCTCAAGATTGAGGGATCAAGAAACCATGTCACGGAAGCCCTCTCAGGGTCTGAAGAACCTTGCAAAGGATGAGTATGAGAGCAACTTCATTTCGGCTGTAGTACCTCCTGGTGAAATTGGGGTGCAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAGATGGCACTTAATGAACTTGTCATCCTTCCGATGAGGAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTGCGGCCTTGCAAAGGAATACTACTTTTTGGTCCTCCTGGTACGGGGAAAACACTTCTGGCCAAGGCACTTGCAACAGAAGCAGGCGCAAATTTTATCAGCATAACTGGTTCTACTCTAACATCAAAGTGGTTTGGAGATGCTGAGAAACTTACCAAGGCCCTTTTCTCCTTTGCTAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCTCGAGGGGGTGCTTTTGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCGGCTTGGGATGGATTGAGGACAAAAGAGAGTCAAAGAATTCTCATTCTTGGTGCAACAAACAGGCCTTTTGATCTTGATGATGCTGTTATACGCCGCTTACCAAGAAGGATATATGTGGATTTGCCAGATGCTGAAAATCGGATGAAGATCTTAAGAATCTTTCTTGCACAAGAAAATCTTGATCATGATTTTCACTTTGACAAACTTGCTAACTTAACTGAGGGATACTCTGGCAGTGATTTGAAGAACCTTTGCATTGCTGCGGCATATAGACCTGTTCAAGAGCTGCTAGAGAACGAAAAGAAGGCGAGCTCCAGTGGTCCAACATCCGTATTAAGGCCTCTAAAATTGGATGATTTTATTCAGGCAAAATCAAAGGTTGGCCCATCAGTTGCCTATGATGCGGCAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGTGGAAGCAGGACAAAATCTCCATTTGGATTTTGA 3111 0.4195 MYLRRIQCRDWRWGVSLQPLKYLIRPRRYGHACFQSLCPKTTVEECVSHDIIVKRRLLESFLSRVGSSNRSCTDLNRRPSSYLRSTQLRFYSSESDGRNASEGNHVNANDGARCDKQKNWQDKFGEDAKLCNAHAQLGKHDQEEWLKNEKIAIENKKRESPFLTRKDKFKNEFLRRVVPWEKINISWDTFPYYIHENTKNLLLECAASHLRHNKVASSYGTRLSSSSGRILLQSVPGTELYRERLVRALAQDLKVPLLVLDSNILAPYYIDDDISSSECESDDDNAESGEEASLESENEDDNNEEEWTSSAEAKSDASDNEEHDAIATAEAALKKVKAAVQKLVPYNVEDFEKRSSEESENSESTKSEVVKPSDPSGCQLKKGDRVKYIGPSVQMKVNNSRIILGKIMTSDGPTNAYTNIHGRSLSNGQRGEVYEVEGDQAAVIMDISEDDTKEGELEKSNEHTDSRLCWIHVKDIEHDPDAQVQDCYIAMEALCEVLDSKQPLIVYFPDSTQWFHKSILKSNRKEFFRKVQEMFDKLSGPVVLICGQNKIQSGSKEKKQFTMILPNFGRVGKLPLSLKHLTEGLGATKRSDDDELHKLFTNVLCIHPPKEDDQLGTFKKQLEEDRKIVISRSSLNELHKVLEEHELSCLDLLQVNTDGVILTKQKAEKVVGWAKNNYLSSCPLPYVKGERLCLPRESLEIAISRLRDQETMSRKPSQGLKNLAKDEYESNFISAVVPPGEIGVQFDDIGALEDVKMALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRTKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDHDFHFDKLANLTEGYSGSDLKNLCIAAAYRPVQELLENEKKASSSGPTSVLRPLKLDDFIQAKSKVGPSVAYDAASMNELRKWNEMYGEGGSRTKSPFGF 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4843g00009 1036 Gene3D - 917 1002 - -
Pral4843g00009 1036 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 743 919 - -
Pral4843g00009 1036 MobiDBLite consensus disorder prediction 275 322 - -
Pral4843g00009 1036 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 744 965 IPR027417 -
Pral4843g00009 1036 Gene3D - 744 1020 IPR027417 -
Pral4843g00009 1036 ProSitePatterns AAA-protein family signature. 888 907 IPR003960 GO:0005524|GO:0016887
Pral4843g00009 1036 MobiDBLite consensus disorder prediction 93 113 - -
Pral4843g00009 1036 MobiDBLite consensus disorder prediction 307 322 - -
Pral4843g00009 1036 Pfam ATPase family associated with various cellular activities (AAA) 785 915 IPR003959 GO:0005524|GO:0016887
Pral4843g00009 1036 Pfam AAA+ lid domain 939 973 IPR041569 -
Pral4843g00009 1036 MobiDBLite consensus disorder prediction 275 306 - -
Pral4843g00009 1036 MobiDBLite consensus disorder prediction 352 382 - -
Pral4843g00009 1036 SMART AAA_5 781 918 IPR003593 GO:0016887
Pral4843g00009 1036 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 168 1031 - -
Pral4843g00009 1036 MobiDBLite consensus disorder prediction 352 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4843g00009 Pral-Chr4843 46000 58426 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4843g00009 779 979 Calmodulin-binding Proteins AT3G56690 35.096 4.11e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4843g00009 - - gmx:100802939 1513.82