Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4843g00007 ATGTACTTGAGGAGAATACAATGTCGAGATTGGAGGTGGGGCGTTTCACTTCAGCCACTCAAATACTTAATTAGGCCAAGACGCTATGGTCATGCATGCTTTCAATCTCTGTGCCCTAAGACTACCGTGGAAGAATGTGTTTCACATGATATTATAGTAAAGAGACGTCTATTGGAATCTTTTTTATCTAGGGTCGGATCATCTAATAGGAGTTGTACTGATCTGAACAGAAGGCCTAGTTCATATTTGAGAAGTACTCAGTTACGCTTCTACAGTTCTGAAAGTGATGGAAGGAATGCTAGTGAGGGCAACCATGTAAACGCAAATGATGGAGCTCGCTGTGATAAGCAAAAGAACTGGCAAGATAAGTTTGGGGAAGATGCCAAACTCTGTAATGCTCATGCTCAACTTGGGAAACATGATCAAGAGGAGTGGCTCAAGAATGAGAAGATTGCCATTGAAAATAAAAAGAGAGAATCACCCTTTTTAACCAGAAAGGATAAGTTCAAAAATGAGTTTCTGAGAAGGGTTGTTCCTTGGGAGAAAATAAACATTTCATGGGACACATTTCCTTACTATATTCATGAGAATACCAAAAATCTTCTCTTGGAATGTGCCGCTTCCCATTTGAGACATAATAAGGTTGCTTCTTCTTATGGGACTCGCCTCTCATCTTCAAGTGGGAGAATATTGCTTCAGAGCGTGCCTGGTACTGAGCTATATCGAGAGAGATTAGTTAGAGCACTTGCACAAGATCTAAAAGTCCCCCTACTGGTGCTTGATAGCAATATCCTTGCTCCTTATTATATCGATGATGACATATCTTCATCAGAATGCGAGTCTGATGATGATAATGCAGAATCTGGGGAGGAGGCTTCTCTGGAGTCCGAGAATGAAGATGATAACAACGAAGAAGAGTGGACTAGTAGTGCTGAGGCAAAGTCAGATGCCAGTGATAACGAAGAACATGATGCGATAGCAACTGCTGAAGCAGCCCTAAAGAAGGTGAAAGCAGCTGTTCAGAAACTTGTTCCTTACAACGTTGAAGACTTTGAAAAGAGGTCATCTGAAGAGTCAGAAAATTCTGAGTCAACCAAATCTGAAGTTGTGAAGCCTTCTGACCCATCTGGATGCCAATTGAAGAAAGGTGACCGTGTGAAATACATTGGGCCATCTGTTCAAATGAAAGTCAACAATAGGATCATACTGGGGAAGATAATGACATCTGATGGCCCAACTAATGCTTACACTAACATCCATGGCAGATCTTTGTCCAATGGTCAACGGGGAGAGGTATATGAGGTGGAGGGGGATCAAGCTGCTGTCATCATGGACATTAGCGAAGATGATACAAAGGAGGGAGAGTTGGAGAAATCTAATGAACATACGGATTCACGACTTTGTTGGATACATGTTAAGGACATTGAGCATGACCCTGATGCTCAAGTACAGGATTGCTACATAGCTATGGAGGCTCTATGCGAGGTTTTGGATTCCAAACAACCTCTTATTGTCTATTTTCCAGACAGTACACAGTGGTTTCATAAATCAATCCTGAAGTCAAACAGAAAAGAGTTCTTTCGTAAGGTTCAAGAAATGTTTGACAAGTTGTCTGGTCCAGTTGTGTTGATTTGTGGACAAAACAAAATTCAATCAGGGTCAAAAGAGAAAAAGCAATTTACAATGATACTTCCAAACTTTGGACGCGTTGGTAAGCTGCCTCTTTCTCTGAAACACTTGACTGAGGGACTTGGAGCAACAAAGAGATCGGATGATGATGAACTCCACAAGCTTTTCACTAATGTTTTGTGCATACATCCGCCTAAAGAGGACGATCAGCTTGGAACTTTTAAAAAACAACTTGAGGAAGACAGGAAAATTGTGATTTCACGTAGTAGTTTGAATGAATTACACAAGGTTCTTGAAGAACATGAGCTATCATGCTTGGACCTCTTGCAAGTAAATACTGATGGTGTTATTCTGACAAAGCAAAAGGCTGAAAAGGTGGTGGGATGGGCAAAAAATAATTACTTGTCATCTTGCCCACTTCCATATGTTAAAGGAGAACGATTGTGCTTGCCTCGTGAAAGTCTTGAAATTGCAATCTCAAGATTGAGGGATCAAGAAACCATGTCACGGAAGCCCTCTCAGGGTCTGAAGAACCTTGCAAAGGATGAGTATGAGAGCAACTTCATTTCGGCTGTAGTACCTCCTGGTGAAATTGGGGTGCAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAGATGGCACTTAATGAACTTGTCATCCTTCCGATGAGGAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTGCGGCCTTGCAAAGGAATACTACTTTTTGGTCCTCCTGGTACGGGGAAAACACTTCTGGCCAAGGCACTTGCAACAGAAGCAGGCGCAAATTTTATCAGCATAACTGGTTCTACTCTAACATCAAAGTGGTTTGGAGATGCTGAGAAACTTACCAAGGCCCTTTTCTCCTTTGCTAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCTCGAGGGGGTGCTTTTGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCGGCTTGGGATGGATTGAGGACAAAAGAGAGTCAAAGAATTCTCATTCTTGGTGCAACAAACAGGCCTTTTGATCTTGATGATGCTGTTATACGCCGCTTACCAAGAAGGATATATGTGGATTTGCCAGATGCTGAAAATCGGATGAAGATCTTAAGAATCTTTCTTGCACAAGAAAATCTTGATCATGATTTTCACTTTGACAAACTTGCTAACTTAACTGAGGGATACTCTGGCAGTGATTTGAAGAACCTTTGCATTGCTGCGGCATATAGACCTGTTCAAGAGCTGCTAGAGAACGAAAAGAAGGCGAGCTCCAGTGGTCCAACATCCGTATTAAGGCCTCTAAAATTGGATGATTTTATTCAGGCAAAATCAAAGGTTGGCCCATCAGTTGCCTATGATGCGGCAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGTGGAAGCAGGACAAAATCTCCATTTGGATTTTGA 3108 0.4192 MYLRRIQCRDWRWGVSLQPLKYLIRPRRYGHACFQSLCPKTTVEECVSHDIIVKRRLLESFLSRVGSSNRSCTDLNRRPSSYLRSTQLRFYSSESDGRNASEGNHVNANDGARCDKQKNWQDKFGEDAKLCNAHAQLGKHDQEEWLKNEKIAIENKKRESPFLTRKDKFKNEFLRRVVPWEKINISWDTFPYYIHENTKNLLLECAASHLRHNKVASSYGTRLSSSSGRILLQSVPGTELYRERLVRALAQDLKVPLLVLDSNILAPYYIDDDISSSECESDDDNAESGEEASLESENEDDNNEEEWTSSAEAKSDASDNEEHDAIATAEAALKKVKAAVQKLVPYNVEDFEKRSSEESENSESTKSEVVKPSDPSGCQLKKGDRVKYIGPSVQMKVNNRIILGKIMTSDGPTNAYTNIHGRSLSNGQRGEVYEVEGDQAAVIMDISEDDTKEGELEKSNEHTDSRLCWIHVKDIEHDPDAQVQDCYIAMEALCEVLDSKQPLIVYFPDSTQWFHKSILKSNRKEFFRKVQEMFDKLSGPVVLICGQNKIQSGSKEKKQFTMILPNFGRVGKLPLSLKHLTEGLGATKRSDDDELHKLFTNVLCIHPPKEDDQLGTFKKQLEEDRKIVISRSSLNELHKVLEEHELSCLDLLQVNTDGVILTKQKAEKVVGWAKNNYLSSCPLPYVKGERLCLPRESLEIAISRLRDQETMSRKPSQGLKNLAKDEYESNFISAVVPPGEIGVQFDDIGALEDVKMALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRTKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDHDFHFDKLANLTEGYSGSDLKNLCIAAAYRPVQELLENEKKASSSGPTSVLRPLKLDDFIQAKSKVGPSVAYDAASMNELRKWNEMYGEGGSRTKSPFGF 1035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4843g00007 1035 ProSitePatterns AAA-protein family signature. 887 906 IPR003960 GO:0005524|GO:0016887
Pral4843g00007 1035 Pfam AAA+ lid domain 938 972 IPR041569 -
Pral4843g00007 1035 SMART AAA_5 780 917 IPR003593 GO:0016887
Pral4843g00007 1035 MobiDBLite consensus disorder prediction 275 322 - -
Pral4843g00007 1035 Gene3D - 743 1019 IPR027417 -
Pral4843g00007 1035 MobiDBLite consensus disorder prediction 352 383 - -
Pral4843g00007 1035 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 742 918 - -
Pral4843g00007 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 743 964 IPR027417 -
Pral4843g00007 1035 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 168 1030 - -
Pral4843g00007 1035 Gene3D - 916 1001 - -
Pral4843g00007 1035 MobiDBLite consensus disorder prediction 307 322 - -
Pral4843g00007 1035 MobiDBLite consensus disorder prediction 93 113 - -
Pral4843g00007 1035 Pfam ATPase family associated with various cellular activities (AAA) 784 914 IPR003959 GO:0005524|GO:0016887
Pral4843g00007 1035 MobiDBLite consensus disorder prediction 275 306 - -
Pral4843g00007 1035 MobiDBLite consensus disorder prediction 352 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4843g00007 Pral-Chr4843 46000 58818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4843g00007 778 978 Calmodulin-binding Proteins AT3G56690 35.096 3.93e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4843g00007 - - gmx:100802939 1517.29