Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4843g00006 ATGTACTTGAGGAGAATACAATGTCGAGATTGGAGGTGGGGCGTTTCACTTCAGCCACTCAAATACTTAATTAGGCCAAGACGCTATGGTCATGCATGCTTTCAATCTCTGTGCCCTAAGACTACCGTGGAAGAATGTGTTTCACATGATATTATAGTAAAGAGACGTCTATTGGAATCTTTTTTATCTAGGGTCGGATCATCTAATAGGAGTTGTACTGATCTGAACAGAAGGCCTAGTTCATATTTGAGAAGTACTCAGTTACGCTTCTACAGTTCTGAAAGTGATGGAAGGAATGCTAGTGAGGGCAACCATGTAAACGCAAATGATGGAGCTCGCTGTGATAAGCAAAAGAACTGGCAAGATAAGTTTGGGGAAGATGCCAAACTCTGTAATGCTCATGCTCAACTTGGGAAACATGATCAAGAGGAGTGGCTCAAGAATGAGAAGATTGCCATTGAAAATAAAAAGAGAGAATCACCCTTTTTAACCAGAAAGGATAAGTTCAAAAATGAGTTTCTGAGAAGGGTTGTTCCTTGGGAGAAAATAAACATTTCATGGGACACATTTCCTTACTATATTCATGAGAATACCAAAAATCTTCTCTTGGAATGTGCCGCTTCCCATTTGAGACATAATAAGGTTGCTTCTTCTTATGGGACTCGCCTCTCATCTTCAAGTGGGAGAATATTGCTTCAGAGCGTGCCTGGTACTGAGCTATATCGAGAGAGATTAGTTAGAGCACTTGCACAAGATCTAAAAGTCCCCCTACTGGTGCTTGATAGCAATATCCTTGCTCCTTATTATATCGATGATGACATATCTTCATCAGAATGCGAGTCTGATGATGATAATGCAGAATCTGGGGAGGAGGCTTCTCTGGAGTCCGAGAATGAAGATGATAACAACGAAGAAGAGTGGACTAGTAGTGCTGAGGCAAAGTCAGATGCCAGTGATAACGAAGAACATGATGCGATAGCAACTGCTGAAGCAGCCCTAAAGAAGGTGAAAGCAGCTGTTCAGAAACTTGTTCCTTACAACGTTGAAGACTTTGAAAAGAGGTCATCTGAAGAGTCAGAAAATTCTGAGTCAACCAAATCTGAAGTTGTGAAGCCTTCTGACCCATCTGGATGCCAATTGAAGAAAGGTGACCGTGTGAAATACATTGGGCCATCTGTTCAAATGAAAGTCAACAATAGATCTTTGTCCAATGGTCAACGGGGAGAGGTATATGAGGTGGAGGGGGATCAAGCTGCTGTCATCATGGACATTAGCGAAGATGATACAAAGGAGGGAGAGTTGGAGAAATCTAATGAACATACGGATTCACGACTTTGTTGGATACATGTTAAGGACATTGAGCATGACCCTGATGCTCAAGTACAGGATTGCTACATAGCTATGGAGGCTCTATGCGAGGTTTTGGATTCCAAACAACCTCTTATTGTCTATTTTCCAGACAGTACACAGTGGTTTCATAAATCAATCCTGAAGTCAAACAGAAAAGAGTTCTTTCGTAAGGTTCAAGAAATGTTTGACAAGTTGTCTGGTCCAGTTGTGTTGATTTGTGGACAAAACAAAATTCAATCAGGGTCAAAAGAGAAAAAGCAATTTACAATGATACTTCCAAACTTTGGACGCGTTGGTAAGCTGCCTCTTTCTCTGAAACACTTGACTGAGGGACTTGGAGCAACAAAGAGATCGGATGATGATGAACTCCACAAGCTTTTCACTAATGTTTTGTGCATACATCCGCCTAAAGAGGACGATCAGCTTGGAACTTTTAAAAAACAACTTGAGGAAGACAGGAAAATTGTGATTTCACGTAGTAGTTTGAATGAATTACACAAGGTTCTTGAAGAACATGAGCTATCATGCTTGGACCTCTTGCAAGTAAATACTGATGGTGTTATTCTGACAAAGCAAAAGGCTGAAAAGGTGGTGGGATGGGCAAAAAATAATTACTTGTCATCTTGCCCACTTCCATATGTTAAAGGAGAACGATTGTGCTTGCCTCGTGAAAGTCTTGAAATTGCAATCTCAAGATTGAGGGATCAAGAAACCATGTCACGGAAGCCCTCTCAGGGTCTGAAGAACCTTGCAAAGGATGAGTATGAGAGCAACTTCATTTCGGCTGTAGTACCTCCTGGTGAAATTGGGGTGCAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAGATGGCACTTAATGAACTTGTCATCCTTCCGATGAGGAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTGCGGCCTTGCAAAGGAATACTACTTTTTGGTCCTCCTGGTACGGGGAAAACACTTCTGGCCAAGGCACTTGCAACAGAAGCAGGCGCAAATTTTATCAGCATAACTGGTTCTACTCTAACATCAAAGTGGTTTGGAGATGCTGAGAAACTTACCAAGGCCCTTTTCTCCTTTGCTAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCTCGAGGGGGTGCTTTTGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCGGCTTGGGATGGATTGAGGACAAAAGAGAGTCAAAGAATTCTCATTCTTGGTGCAACAAACAGGCCTTTTGATCTTGATGATGCTGTTATACGCCGCTTACCAAGAAGGATATATGTGGATTTGCCAGATGCTGAAAATCGGATGAAGATCTTAAGAATCTTTCTTGCACAAGAAAATCTTGATCATGATTTTCACTTTGACAAACTTGCTAACTTAACTGAGGGATACTCTGGCAGTGATTTGAAGAACCTTTGCATTGCTGCGGCATATAGACCTGTTCAAGAGCTGCTAGAGAACGAAAAGAAGGCGAGCTCCAGTGGTCCAACATCCGTATTAAGGCCTCTAAAATTGGATGATTTTATTCAGGCAAAATCAAAGGTTGGCCCATCAGTTGCCTATGATGCGGCAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGTGGAAGCAGGACAAAATCTCCATTTGGATTTTGA 3042 0.4188 MYLRRIQCRDWRWGVSLQPLKYLIRPRRYGHACFQSLCPKTTVEECVSHDIIVKRRLLESFLSRVGSSNRSCTDLNRRPSSYLRSTQLRFYSSESDGRNASEGNHVNANDGARCDKQKNWQDKFGEDAKLCNAHAQLGKHDQEEWLKNEKIAIENKKRESPFLTRKDKFKNEFLRRVVPWEKINISWDTFPYYIHENTKNLLLECAASHLRHNKVASSYGTRLSSSSGRILLQSVPGTELYRERLVRALAQDLKVPLLVLDSNILAPYYIDDDISSSECESDDDNAESGEEASLESENEDDNNEEEWTSSAEAKSDASDNEEHDAIATAEAALKKVKAAVQKLVPYNVEDFEKRSSEESENSESTKSEVVKPSDPSGCQLKKGDRVKYIGPSVQMKVNNRSLSNGQRGEVYEVEGDQAAVIMDISEDDTKEGELEKSNEHTDSRLCWIHVKDIEHDPDAQVQDCYIAMEALCEVLDSKQPLIVYFPDSTQWFHKSILKSNRKEFFRKVQEMFDKLSGPVVLICGQNKIQSGSKEKKQFTMILPNFGRVGKLPLSLKHLTEGLGATKRSDDDELHKLFTNVLCIHPPKEDDQLGTFKKQLEEDRKIVISRSSLNELHKVLEEHELSCLDLLQVNTDGVILTKQKAEKVVGWAKNNYLSSCPLPYVKGERLCLPRESLEIAISRLRDQETMSRKPSQGLKNLAKDEYESNFISAVVPPGEIGVQFDDIGALEDVKMALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRTKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDHDFHFDKLANLTEGYSGSDLKNLCIAAAYRPVQELLENEKKASSSGPTSVLRPLKLDDFIQAKSKVGPSVAYDAASMNELRKWNEMYGEGGSRTKSPFGF 1013
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4843g00006 1013 SMART AAA_5 758 895 IPR003593 GO:0016887
Pral4843g00006 1013 ProSitePatterns AAA-protein family signature. 865 884 IPR003960 GO:0005524|GO:0016887
Pral4843g00006 1013 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 168 1008 - -
Pral4843g00006 1013 Gene3D - 721 997 IPR027417 -
Pral4843g00006 1013 MobiDBLite consensus disorder prediction 275 322 - -
Pral4843g00006 1013 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 721 942 IPR027417 -
Pral4843g00006 1013 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 720 896 - -
Pral4843g00006 1013 Gene3D - 894 979 - -
Pral4843g00006 1013 MobiDBLite consensus disorder prediction 307 322 - -
Pral4843g00006 1013 MobiDBLite consensus disorder prediction 93 113 - -
Pral4843g00006 1013 MobiDBLite consensus disorder prediction 275 306 - -
Pral4843g00006 1013 MobiDBLite consensus disorder prediction 352 382 - -
Pral4843g00006 1013 Pfam AAA+ lid domain 916 950 IPR041569 -
Pral4843g00006 1013 MobiDBLite consensus disorder prediction 352 367 - -
Pral4843g00006 1013 Pfam ATPase family associated with various cellular activities (AAA) 762 892 IPR003959 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4843g00006 Pral-Chr4843 46000 58818 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4843g00006 756 956 Calmodulin-binding Proteins AT3G56690 35.096 4.19e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4843g00006 - - gmx:100812718 1501.11