Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4843g00004 ATGTACTTGAGGAGAATACAATGTCGAGATTGGAGGTGGGGCGTTTCACTTCAGCCACTCAAATACTTAATTAGGCCAAGACGCTATGGTCATGCATGCTTTCAATCTCTGTGCCCTAAGACTACCGTGGAAGAATGTGTTTCACATGATATTATAGTAAAGAGACGTCTATTGGAATCTTTTTTATCTAGGGTCGGATCATCTAATAGGAGTTGTACTGATCTGAACAGAAGGCCTAGTTCATATTTGAGAAGTACTCAGTTACGCTTCTACAGTTCTGAAAGTGATGGAAGGAATGCTAGTGAGGGCAACCATGTAAACGCAAATGATGGAGCTCGCTGTGATAAGCAAAAGAACTGGCAAGATAAGTTTGGGGAAGATGCCAAACTCTGTAATGCTCATGCTCAACTTGGGAAACATGATCAAGAGGAGTGGCTCAAGAATGAGAAGATTGCCATTGAAAATAAAAAGAGAGAATCACCCTTTTTAACCAGAAAGGATAAGTTCAAAAATGAGTTTCTGAGAAGGGTTGTTCCTTGGGAGAAAATAAACATTTCATGGGACACATTTCCTTACTATATTCATGAGAATACCAAAAATCTTCTCTTGGAATGTGCCGCTTCCCATTTGAGACATAATAAGGTTGCTTCTTCTTATGGGACTCGCCTCTCATCTTCAAGTGGGAGAATATTGCTTCAGAGCGTGCCTGGTACTGAGCTATATCGAGAGAGATTAGTTAGAGCACTTGCACAAGATCTAAAAGTCCCCCTACTGGTGCTTGATAGCAATATCCTTGCTCCTTATTATATCGATGATGACATATCTTCATCAGAATGCGAGTCTGATGATGATAATGCAGAATCTGGGGAGGAGGCTTCTCTGGAGTCCGAGAATGAAGATGATAACAACGAAGAAGAGTGGACTAGTAGTGCTGAGGCAAAGTCAGATGCCAGTGATAACGAAGAACATGATGCGATAGCAACTGCTGAAGCAGCCCTAAAGAAGAGGTCATCTGAAGAGTCAGAAAATTCTGAGTCAACCAAATCTGAAGTTGTGAAGCCTTCTGACCCATCTGGATGCCAATTGAAGAAAGGTGACCGTGTGAAATACATTGGGCCATCTGTTCAAATGAAAGTCAACAATAGATCTTTGTCCAATGGTCAACGGGGAGAGGTATATGAGGTGGAGGGGGATCAAGCTGCTGTCATCATGGACATTAGCGAAGATGATACAAAGGAGGGAGAGTTGGAGAAATCTAATGAACATACGGATTCACGACTTTGTTGGATACATGTTAAGGACATTGAGCATGACCCTGATGCTCAAGTACAGGATTGCTACATAGCTATGGAGGCTCTATGCGAGGTTTTGGATTCCAAACAACCTCTTATTGTCTATTTTCCAGACAGTACACAGTGGTTTCATAAATCAATCCTGAAGTCAAACAGAAAAGAGTTCTTTCGTAAGGTTCAAGAAATGTTTGACAAGTTGTCTGGTCCAGTTGTGTTGATTTGTGGACAAAACAAAATTCAATCAGGGTCAAAAGAGAAAAAGCAATTTACAATGATACTTCCAAACTTTGGACGCGTTGGTAAGCTGCCTCTTTCTCTGAAACACTTGACTGAGGGACTTGGAGCAACAAAGAGATCGGATGATGATGAACTCCACAAGCTTTTCACTAATGTTTTGTGCATACATCCGCCTAAAGAGGACGATCAGCTTGGAACTTTTAAAAAACAACTTGAGGAAGACAGGAAAATTGTGATTTCACGTAGTAGTTTGAATGAATTACACAAGGTTCTTGAAGAACATGAGCTATCATGCTTGGACCTCTTGCAAGTAAATACTGATGGTGTTATTCTGACAAAGCAAAAGGCTGAAAAGGTGGTGGGATGGGCAAAAAATAATTACTTGTCATCTTGCCCACTTCCATATGTTAAAGGAGAACGATTGTGCTTGCCTCGTGAAAGTCTTGAAATTGCAATCTCAAGATTGAGGGATCAAGAAACCATGTCACGGAAGCCCTCTCAGGGTCTGAAGAACCTTGCAAAGGATGAGTATGAGAGCAACTTCATTTCGGCTGTAGTACCTCCTGGTGAAATTGGGGTGCAGTTTGATGACATAGGTGCTCTTGAAGATGTGAAGATGGCACTTAATGAACTTGTCATCCTTCCGATGAGGAGGCCAGAGCTTTTCTCTCGTGGAAACTTGTTGCGGCCTTGCAAAGGAATACTACTTTTTGGTCCTCCTGGTACGGGGAAAACACTTCTGGCCAAGGCACTTGCAACAGAAGCAGGCGCAAATTTTATCAGCATAACTGGTTCTACTCTAACATCAAAGTGGTTTGGAGATGCTGAGAAACTTACCAAGGCCCTTTTCTCCTTTGCTAGCAAGCTTGCTCCTGTCATTATATTTGTTGATGAAGTTGATAGTTTGCTTGGTGCTCGAGGGGGTGCTTTTGAGCATGAAGCCACTAGAAGAATGAGGAATGAGTTCATGGCGGCTTGGGATGGATTGAGGACAAAAGAGAGTCAAAGAATTCTCATTCTTGGTGCAACAAACAGGCCTTTTGATCTTGATGATGCTGTTATACGCCGCTTACCAAGAAGGATATATGTGGATTTGCCAGATGCTGAAAATCGGATGAAGATCTTAAGAATCTTTCTTGCACAAGAAAATCTTGATCATGATTTTCACTTTGACAAACTTGCTAACTTAACTGAGGGATACTCTGGCAGTGATTTGAAGAACCTTTGCATTGCTGCGGCATATAGACCTGTTCAAGAGCTGCTAGAGAACGAAAAGAAGGCGAGCTCCAGTGGTCCAACATCCGTATTAAGGCCTCTAAAATTGGATGATTTTATTCAGGCAAAATCAAAGGTTGGCCCATCAGTTGCCTATGATGCGGCAAGCATGAATGAGTTGAGGAAGTGGAATGAAATGTACGGAGAAGGTGGAAGCAGGACAAAATCTCCATTTGGATTTTGA 2988 0.4193 MYLRRIQCRDWRWGVSLQPLKYLIRPRRYGHACFQSLCPKTTVEECVSHDIIVKRRLLESFLSRVGSSNRSCTDLNRRPSSYLRSTQLRFYSSESDGRNASEGNHVNANDGARCDKQKNWQDKFGEDAKLCNAHAQLGKHDQEEWLKNEKIAIENKKRESPFLTRKDKFKNEFLRRVVPWEKINISWDTFPYYIHENTKNLLLECAASHLRHNKVASSYGTRLSSSSGRILLQSVPGTELYRERLVRALAQDLKVPLLVLDSNILAPYYIDDDISSSECESDDDNAESGEEASLESENEDDNNEEEWTSSAEAKSDASDNEEHDAIATAEAALKKRSSEESENSESTKSEVVKPSDPSGCQLKKGDRVKYIGPSVQMKVNNRSLSNGQRGEVYEVEGDQAAVIMDISEDDTKEGELEKSNEHTDSRLCWIHVKDIEHDPDAQVQDCYIAMEALCEVLDSKQPLIVYFPDSTQWFHKSILKSNRKEFFRKVQEMFDKLSGPVVLICGQNKIQSGSKEKKQFTMILPNFGRVGKLPLSLKHLTEGLGATKRSDDDELHKLFTNVLCIHPPKEDDQLGTFKKQLEEDRKIVISRSSLNELHKVLEEHELSCLDLLQVNTDGVILTKQKAEKVVGWAKNNYLSSCPLPYVKGERLCLPRESLEIAISRLRDQETMSRKPSQGLKNLAKDEYESNFISAVVPPGEIGVQFDDIGALEDVKMALNELVILPMRRPELFSRGNLLRPCKGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFASKLAPVIIFVDEVDSLLGARGGAFEHEATRRMRNEFMAAWDGLRTKESQRILILGATNRPFDLDDAVIRRLPRRIYVDLPDAENRMKILRIFLAQENLDHDFHFDKLANLTEGYSGSDLKNLCIAAAYRPVQELLENEKKASSSGPTSVLRPLKLDDFIQAKSKVGPSVAYDAASMNELRKWNEMYGEGGSRTKSPFGF 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4843g00004 995 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 703 924 IPR027417 -
Pral4843g00004 995 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 702 878 - -
Pral4843g00004 995 MobiDBLite consensus disorder prediction 275 366 - -
Pral4843g00004 995 Gene3D - 703 979 IPR027417 -
Pral4843g00004 995 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 168 990 - -
Pral4843g00004 995 Pfam ATPase family associated with various cellular activities (AAA) 744 874 IPR003959 GO:0005524|GO:0016887
Pral4843g00004 995 SMART AAA_5 740 877 IPR003593 GO:0016887
Pral4843g00004 995 MobiDBLite consensus disorder prediction 93 113 - -
Pral4843g00004 995 MobiDBLite consensus disorder prediction 307 349 - -
Pral4843g00004 995 MobiDBLite consensus disorder prediction 275 306 - -
Pral4843g00004 995 ProSitePatterns AAA-protein family signature. 847 866 IPR003960 GO:0005524|GO:0016887
Pral4843g00004 995 Pfam AAA+ lid domain 898 932 IPR041569 -
Pral4843g00004 995 Gene3D - 876 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4843g00004 Pral-Chr4843 46000 58818 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4843g00004 738 938 Calmodulin-binding Proteins AT3G56690 35.096 4.31e-31 130