LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4843g00001	ATGTCACGTCAGACTCCCACCTCCGCCTTTCTTAAATCCAAGACCCTCGACAACAAATATATGCTTGGAGATGAGATAGGAAAAGGAGCATACGGTCGAGTTTACAAAGGTTTGGACCTAGAAAATGGAGACTTTGTTGCAATTAAGCAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGCAAGAGATCGATTTATTAAAGAATTTGAACCACAAAAACATTGTAAAATATCTTGGATCCTTGAAGACAAAGACTCACCTTCACATTATTCTTGAGTATGTGGAAAATGGTTCACTAGCTAATATTATCAAGCCAAATAAATTTGGACCTTTTCCTGAATCACTGGTCGCTGTTTATATCGCTCAGGTATTGGAAGGCTTGGTTTACCTACATGAACAGGGTGTCATCCATCGGGATATCAAGGGTGCAAATATATTGACAACCAAAGAGGGTCTAGTCAAACTTGCTGATTTTGGTGTTGCAACGAAGTTGACAGAGGCTGATGTTAATACGCATTCAGTTGTTGGAACTCCATATTGGATGGCTCCAGAGGTTATAGAAATGTCTGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGCTGTACTGTTATTGAACTTCTTACATGCGTTCCTCCGTATTATGATCTACAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAGCATCCTCCAATTCCTAATAGCCTTTCTCCTGATATTACCGATTTTCTGCGTCAATGCTTTAAGAAGGATGCTAGACAAAGGCCTGATGCTAAGGCTCTGTTATCGCACCCATGGATACAAAATTGTAGGCGGGCGCTGCAGTCATCTCTTCGACACAGTGGAACGTTAAGAAATATAGAGGAAGATGATTCCACAGATGTAGCAGCTTCTGGTGATGATCAGAAGAGTGCTGGTGAAGGCTCATCTGTGGAGAAAGTGAACCCACTGAAAGAGCTGTCAATTGAGGTTGTTGGTGGCAGCAAACGTCATGAGGACTTAGGTTCAGATTCTGATTTTCTGAATGAGAAAATAGAGAAGCAGGATGATGTGTTTTCAGATCAAGTTCTCACTTTAGCTATTCATGAGAAGCTGTCTCTACAAACTGGATCTAGTAAGCCCTGTTCTAATGGAGAAGTTGCTATCACAGAGATGAGTACAGATCATGACATTCCCAATACAAAAGACCATAATGAAGTCATGATGCATGGAGAAGTTGGATCTCCAGAATCACGAGGGATTGATAGAAAGCCTGGGGGAAAGGGTAGTTCTGTCACCAGTGGCAGTATATCATTCTGTTTTGGACCAAGAAGTCAGGACAATGGTTCCCTAAAGGCTATGAAGATGCTTCCCTCTTTGGAAGGGAATGAGCTGAGCAGATTTAGCGATCCTCCTGGAGATGCCTCTTTGGATGATTTATTTCATCCATTAGATACCCCTAGAGACTCTGCAGCTGAGGCTTCCACATCTACATCCACATCACACAGGACAAATGATAATGCATCTATGAATAATGGTGGGAAAAGTGATTTGGCGAAAGAGTTGAGGGAAACTATTGCTAGGAAGCCGTGGGAGAAGGAGAATAATGGGAAGAATACTAGTGGTGGGAATCTTTTAGCCTTAATGATGGGAGTCATAAAAGATGATGTAATTGATATAGATGGTCTGGTTTTTGATGAAAAATTGCCTGGAGAAAACCTTTTCCCTTTTCAGGCTGTTGAGTTCAGCAAATTAGTTGGGTCATTGCGACCAGAGGAATCTGAAGATGTGATTGTCACTGCATGTCAGAAGCTTATCACTATCTTTCACCAACGTCCAGAGCAGAAGATTGGTTTTGTTACCCAGCATGGTTTACTTCCACTTACGGACTTGCTAGAAGTTCCTAAAACTCGTGTCATATGTTCTGTACTCCAGCTTATAAATCAAATCATTAAGGATAATACTGATTCAAGAAATGCTTGTCTTGTTGGATTG	1995	0.415	MSRQTPTSAFLKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPNSLSPDITDFLRQCFKKDARQRPDAKALLSHPWIQNCRRALQSSLRHSGTLRNIEEDDSTDVAASGDDQKSAGEGSSVEKVNPLKELSIEVVGGSKRHEDLGSDSDFLNEKIEKQDDVFSDQVLTLAIHEKLSLQTGSSKPCSNGEVAITEMSTDHDIPNTKDHNEVMMHGEVGSPESRGIDRKPGGKGSSVTSGSISFCFGPRSQDNGSLKAMKMLPSLEGNELSRFSDPPGDASLDDLFHPLDKXPRDSAAEASTSTSTSHRTNDNASMNNGGKSDLAKELRETIARKPWEKENNGKNTSGGNLLALMMGVIKDDVIDIDGLVFDEKLPGENLFPFQAVEFSKLVGSLRPEESEDVIVTACQKLITIFHQRPEQKIGFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIIKDNTDFXRNACLVGL	667

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pral4843g00001	667	Gene3D	Transferase(Phosphotransferase) domain 1	17	313	-	-
Pral4843g00001	667	Pfam	Protein kinase domain	21	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pral4843g00001	667	MobiDBLite	consensus disorder prediction	518	536	-	-
Pral4843g00001	667	MobiDBLite	consensus disorder prediction	396	424	-	-
Pral4843g00001	667	MobiDBLite	consensus disorder prediction	492	515	-	-
Pral4843g00001	667	ProSiteProfiles	Protein kinase domain profile.	20	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pral4843g00001	667	SUPERFAMILY	Protein kinase-like (PK-like)	17	275	IPR011009	-
Pral4843g00001	667	CDD	STKc_Cdc7_like	19	274	-	-
Pral4843g00001	667	SUPERFAMILY	ARM repeat	584	659	IPR016024	-
Pral4843g00001	667	SMART	serkin_6	20	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4843g00001	Pral-Chr4843	1109	22360	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4843g00001	1	667	MAP Kinase Kinase Kinase	AT3G13530	68.249	0.0	896

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE-Pl	Pral4843g00001		Pkinase	1.7e-73	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4843g00001	-		-	pcin:129311394	1233.01

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