Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4843g00001 ATGTCACGTCAGACTCCCACCTCCGCCTTTCTTAAATCCAAGACCCTCGACAACAAATATATGCTTGGAGATGAGATAGGAAAAGGAGCATACGGTCGAGTTTACAAAGGTTTGGACCTAGAAAATGGAGACTTTGTTGCAATTAAGCAAGTTTCTTTGGAGAATATTGCTCAGGAGGATCTCAACATCATCATGCAAGAGATCGATTTATTAAAGAATTTGAACCACAAAAACATTGTAAAATATCTTGGATCCTTGAAGACAAAGACTCACCTTCACATTATTCTTGAGTATGTGGAAAATGGTTCACTAGCTAATATTATCAAGCCAAATAAATTTGGACCTTTTCCTGAATCACTGGTCGCTGTTTATATCGCTCAGGTATTGGAAGGCTTGGTTTACCTACATGAACAGGGTGTCATCCATCGGGATATCAAGGGTGCAAATATATTGACAACCAAAGAGGGTCTAGTCAAACTTGCTGATTTTGGTGTTGCAACGAAGTTGACAGAGGCTGATGTTAATACGCATTCAGTTGTTGGAACTCCATATTGGATGGCTCCAGAGGTTATAGAAATGTCTGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGCTGTACTGTTATTGAACTTCTTACATGCGTTCCTCCGTATTATGATCTACAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAGCATCCTCCAATTCCTAATAGCCTTTCTCCTGATATTACCGATTTTCTGCGTCAATGCTTTAAGAAGGATGCTAGACAAAGGCCTGATGCTAAGGCTCTGTTATCGCACCCATGGATACAAAATTGTAGGCGGGCGCTGCAGTCATCTCTTCGACACAGTGGAACGTTAAGAAATATAGAGGAAGATGATTCCACAGATGTAGCAGCTTCTGGTGATGATCAGAAGAGTGCTGGTGAAGGCTCATCTGTGGAGAAAGTGAACCCACTGAAAGAGCTGTCAATTGAGGTTGTTGGTGGCAGCAAACGTCATGAGGACTTAGGTTCAGATTCTGATTTTCTGAATGAGAAAATAGAGAAGCAGGATGATGTGTTTTCAGATCAAGTTCTCACTTTAGCTATTCATGAGAAGCTGTCTCTACAAACTGGATCTAGTAAGCCCTGTTCTAATGGAGAAGTTGCTATCACAGAGATGAGTACAGATCATGACATTCCCAATACAAAAGACCATAATGAAGTCATGATGCATGGAGAAGTTGGATCTCCAGAATCACGAGGGATTGATAGAAAGCCTGGGGGAAAGGGTAGTTCTGTCACCAGTGGCAGTATATCATTCTGTTTTGGACCAAGAAGTCAGGACAATGGTTCCCTAAAGGCTATGAAGATGCTTCCCTCTTTGGAAGGGAATGAGCTGAGCAGATTTAGCGATCCTCCTGGAGATGCCTCTTTGGATGATTTATTTCATCCATTAGATACCCCTAGAGACTCTGCAGCTGAGGCTTCCACATCTACATCCACATCACACAGGACAAATGATAATGCATCTATGAATAATGGTGGGAAAAGTGATTTGGCGAAAGAGTTGAGGGAAACTATTGCTAGGAAGCCGTGGGAGAAGGAGAATAATGGGAAGAATACTAGTGGTGGGAATCTTTTAGCCTTAATGATGGGAGTCATAAAAGATGATGTAATTGATATAGATGGTCTGGTTTTTGATGAAAAATTGCCTGGAGAAAACCTTTTCCCTTTTCAGGCTGTTGAGTTCAGCAAATTAGTTGGGTCATTGCGACCAGAGGAATCTGAAGATGTGATTGTCACTGCATGTCAGAAGCTTATCACTATCTTTCACCAACGTCCAGAGCAGAAGATTGGTTTTGTTACCCAGCATGGTTTACTTCCACTTACGGACTTGCTAGAAGTTCCTAAAACTCGTGTCATATGTTCTGTACTCCAGCTTATAAATCAAATCATTAAGGATAATACTGATTCAAGAAATGCTTGTCTTGTTGGATTG 1995 0.415 MSRQTPTSAFLKSKTLDNKYMLGDEIGKGAYGRVYKGLDLENGDFVAIKQVSLENIAQEDLNIIMQEIDLLKNLNHKNIVKYLGSLKTKTHLHIILEYVENGSLANIIKPNKFGPFPESLVAVYIAQVLEGLVYLHEQGVIHRDIKGANILTTKEGLVKLADFGVATKLTEADVNTHSVVGTPYWMAPEVIEMSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPNSLSPDITDFLRQCFKKDARQRPDAKALLSHPWIQNCRRALQSSLRHSGTLRNIEEDDSTDVAASGDDQKSAGEGSSVEKVNPLKELSIEVVGGSKRHEDLGSDSDFLNEKIEKQDDVFSDQVLTLAIHEKLSLQTGSSKPCSNGEVAITEMSTDHDIPNTKDHNEVMMHGEVGSPESRGIDRKPGGKGSSVTSGSISFCFGPRSQDNGSLKAMKMLPSLEGNELSRFSDPPGDASLDDLFHPLDKXPRDSAAEASTSTSTSHRTNDNASMNNGGKSDLAKELRETIARKPWEKENNGKNTSGGNLLALMMGVIKDDVIDIDGLVFDEKLPGENLFPFQAVEFSKLVGSLRPEESEDVIVTACQKLITIFHQRPEQKIGFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIIKDNTDFXRNACLVGL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4843g00001 667 Gene3D Transferase(Phosphotransferase) domain 1 17 313 - -
Pral4843g00001 667 Pfam Protein kinase domain 21 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4843g00001 667 MobiDBLite consensus disorder prediction 518 536 - -
Pral4843g00001 667 MobiDBLite consensus disorder prediction 396 424 - -
Pral4843g00001 667 MobiDBLite consensus disorder prediction 492 515 - -
Pral4843g00001 667 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4843g00001 667 SUPERFAMILY Protein kinase-like (PK-like) 17 275 IPR011009 -
Pral4843g00001 667 CDD STKc_Cdc7_like 19 274 - -
Pral4843g00001 667 SUPERFAMILY ARM repeat 584 659 IPR016024 -
Pral4843g00001 667 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4843g00001 667 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 15 287 - -
Pral4843g00001 667 MobiDBLite consensus disorder prediction 395 541 - -
Pral4843g00001 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 140 152 IPR008271 GO:0004672|GO:0006468
Pral4843g00001 667 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Pral4843g00001 667 MobiDBLite consensus disorder prediction 429 445 - -
Pral4843g00001 667 FunFam MAP3K epsilon protein kinase 1 17 306 - -
Pral4843g00001 667 PRINTS Tyrosine kinase catalytic domain signature 134 152 IPR001245 GO:0004672|GO:0006468
Pral4843g00001 667 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Pral4843g00001 667 PRINTS Tyrosine kinase catalytic domain signature 96 109 IPR001245 GO:0004672|GO:0006468
Pral4843g00001 667 PRINTS Tyrosine kinase catalytic domain signature 200 222 IPR001245 GO:0004672|GO:0006468
Pral4843g00001 667 MobiDBLite consensus disorder prediction 288 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4843g00001 Pral-Chr4843 1109 22360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4843g00001 1 667 MAP Kinase Kinase Kinase AT3G13530 68.249 0.0 896
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Pral4843g00001 Pkinase 1.7e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4843g00001 - - pcin:129311394 1233.01