Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4842g00004 ATGTCTGGGGTTTGTGCTGCTTCTGACATTTGGAGTGTTGGCTGTACTGTTATTGAACTTCTTACATGCGTTCCTCCGTATTATGATCTACAGCCTATGCCAGCTCTCTTTCGTATTGTTCAGGATGAGCATCCTCCAATTCCTAATAGCCTTTCTCCTGATATTACCGATTTTCTGCGTCAATGCTTTAAGAAGGATGCTAGACAAAGGCCTGATGCTAAGGCTCTGTTATCGCACCCATGGATACAAAATTGTAGGCGGGCGCTGCAGTCATCTCTTCGACACAGTGGAACGTTAAGAAATATAGAGGAAGATGATTCCACAGATGTAGCAGCTTCTGGTGATGATCAGAAGAGTGCTGGTGAAGGCTCATCTGTGGAGAAAGTGAACCCACTGAAAGAGCTGTCAATTGAGGTTGTTGGTGGCAGCAAACGTCATGAGGACTTAGGTTCAGATTCTGATTTTCTGAATGAGAAAATAGAGAAGCAGGATGATGTGTTTTCAGATCAAGTTCTCACTTTAGCTATTCATGAGAAGCTGTCTCTACAAACTGGATCTAGTAAGCCCTGTTCTAATGGAGAAGTTGCTATCACAGAGATGAGTACAGATCATGACATTCCCAATACAAAAGACCATAATGAAGTCATGATGCATGGAGAAGTTGGATCTCCAGAATCACGAGGGATTGATAGAAAGCCTGGGGGAAAGGGTAGTTCTGTCACCAGTGGCAGTATATCATTCTGTTTTGGACCAAGAAGTCAGGACAATGGTTCCCTAAAGGCTATGAAGATGCTTCCCTCTTTGGAAGGGAATGAGCTGAGCAGATTTAGCGATCCTCCTGGAGATGCCTCTTTGGATGATTTATTTCATCCATTAGATAAACACCCTAGAGACTCTGCAGCTGAGGCTTCCACATCTACATCCACATCACACAGGACAAATGATAATGCATCTATGAATAATGGTGGGAAAAGTGATTTGGCGAAAGAGTTGAGGGAAACTATTGCTAGGAAGCCGTGGGAGAAGGAGAATGAAAATGGGAAGAATACTAGTGGTGGGAATCTTTTAGCCTTAATGATGGGAGTCATAAAAGATGATGTAATTGATATAGATGGTCTGGTTTTTGATGAAAAATTGCCTGGAGAAAACCTTTTCCCTTTTCAGGCTGTTGAGTTCAGCAAATTAGTTGGGTCATTGCGACCAGAGGAATCTGAAGATGTGATTGTCACTGCATGTCAGAAGCTTATCACTATCTTTCACCAACGTCCAGAGCAGAAGATTGGTTTTGTTACCCAGCATGGTTTACTTCCACTTACGGACTTGCTAGAAGTTCCTAAAACTCGTGTCATATGTTCTGTACTCCAGCTTATAAATCAAATCATTAAGGATAATACTGATTTTCAAGAAAATGCTTGTCTTGTTGGATTGATTCCCATGGTGATGAGCTTTGCAGTACCTGACCGTCCACGAGAAATTCGCATGGAAGCAGCCTTTTTTTTGCAGCAGCTTTGCCAGTCAAGCTCATTGACATTACAAATGTTTATTGCTTGTCGTGGAATCCCAGTTTTGGTAGGATTTCTGGAGGCTGATTATGCCAAGTACAGGGAAATGGTGCACCTGGCTATTGATGGCATGTGGCAAGTCTTCAAGCTCCAGCGATCAACCCCTAGAAATGACTTCTGTCGAATAGCTGCAAAGAATGGAATACTCCTGAGGCTTATAAATACCCTTTATAGCTTAAATGAGGCAACACGACTAGCTTCTATATCTGTTGGGGTTGGATTTCCGGTTGATGGTTTGGCTCAACGTCCCCGTTCTGGTCCCTTGGATTTGGCACATCCTATTAGCATTCAGAATGATGCGTTGCTCTCTTCAGCAGATCAGTTGGATCTCCCTAAAGTGAGGCATGGGATACCTGATCATCACTTGGAACCTTTACATGCCTCAACCTCACATCCTCAAAGATCTGATGGTAATTTCTCTGTAGACGTTGATAGGCTTCAACCTAGCAATGCAGTGGCTGAATTTACATCAGAAAAAAGTACAAATGTAGCATCCAGGGAATCTTCAAAGGAGAGGGACAATGTGGATCGATGGAAAACTGATTCTTCTCGAGCAGATGTTGAACTTAGACAGCAGCGTATTAGTAATTCTGCTAGCAGGGCATCAACTGATAGGGCTTCGAAATTGACAGAACCTACATCAAATGCGTTATCAATGGCAGGTGCTATGCAGCAAGAGCAAGTTAGACCGCTTCTTAGCTTGTTAGAGAAAGAGCCTCCATCTAGACAAATATCTGGTCAGCTTGAATATGTACGGCAGGTGTCAGGATTAGAAAGGCATGAAAGTGTACTGCCTTTACTACATGCCTCTGAGAAGAAGACAAATGGTGAGCTGGACTTTTTGATGGCAGAATTTGCGGATGTTTCCCAACGTGGAAGAGAAAATGGAAATCTTGACGCTGGTGCTAGAGTGTCTTACAAAGCTGCTTCAAAGAAACCAGGGGCTCTGGGGTCTAATGAAGGGGCTGCTTCCACATCTGGGATTGTATCTCAGACAGCTTCAGGTGTGCTGTCTGGTTCAGGCGTCTTAAATGCTAGACCTGGCAGTGCAACTTCATCGGGGCTCCTTTCCCACATGGTTTCATCATTGAATGCTGATGTTGCCAGGGAGTACCTAGAAAAGGTGGCAGATCTTCTTCTTGAGTTTGCTCAAGCTGACACGACAGTGAAGTCTTATATGTGTAGCCAAAGCTTGCTCAGCCGTCTTTTCCAGATGTTCAATAGGGTGGAGCCTCAAATTCTGTTAAAGATACTGAAGTGTATTAATCATCTTTCAACTGATCCTAACTGCTTAGAGAATCTCCAACGTGCTGAAGCAATAAAATACTTGATACCAAATCTGCAACTCAAAGAAGGGCCTCTAATATCACAAATACATCATGAGGTCTTGAATGCACTGTTCAGTTTATGCAAAATAAACAAGAGGAGACAAGAACAAGCTGCTGAAAATGGGATTATTCCCCATTTGATGCAATTCATCACCTCAAATTCTCCCTTGAAACAATATGCATTGCCTCTATTGTGTGACATGGCCCATGCATCTCGAAATTCAAGGGAGCAGTTAAGGGCCCATGGTGGTTTGGATGTCTATTTGAACCTTCTTGAGGATGGGACTTGGTCAGTTACGGCATTAGATTCTATTGCTGTTTGCTTGGCTCATGATAATGACAATAGGAAGGTTGAACAAGCATTACTAAAAAAGGATGCGGTGCAGAGGCTGGTCAAGTTCTTCCAGACTTGTCCAGAGCAGCATTTTGTGAAAATACTGGAGCCATTCTTGAAAATCATCACAAAATCTGTACGGATCAATACCACATTAGCTGTTAATGGATTAACGCCCTTACTGATTGCAAGGCTTGATCATCGAGATGCTATAGCTCGTCTTAATTTACTCAAGCTGATAAAGGCTGTTTATGAGCATCACCCTCAGCCCAAGAAGCTGATCGTAGAGAATGACTTGCCTCTGAAGCTACAAAACTTAATAGAGGAAAGAAGAGACGGGCAAAGCTCGGGAGGCCAAGTGTTGGTCAAACAGATGGCTACTTCCTTACTTAAAGCTCTACACATAAACACGGTTTTGTAA 3645 0.4299 MSGVCAASDIWSVGCTVIELLTCVPPYYDLQPMPALFRIVQDEHPPIPNSLSPDITDFLRQCFKKDARQRPDAKALLSHPWIQNCRRALQSSLRHSGTLRNIEEDDSTDVAASGDDQKSAGEGSSVEKVNPLKELSIEVVGGSKRHEDLGSDSDFLNEKIEKQDDVFSDQVLTLAIHEKLSLQTGSSKPCSNGEVAITEMSTDHDIPNTKDHNEVMMHGEVGSPESRGIDRKPGGKGSSVTSGSISFCFGPRSQDNGSLKAMKMLPSLEGNELSRFSDPPGDASLDDLFHPLDKHPRDSAAEASTSTSTSHRTNDNASMNNGGKSDLAKELRETIARKPWEKENENGKNTSGGNLLALMMGVIKDDVIDIDGLVFDEKLPGENLFPFQAVEFSKLVGSLRPEESEDVIVTACQKLITIFHQRPEQKIGFVTQHGLLPLTDLLEVPKTRVICSVLQLINQIIKDNTDFQENACLVGLIPMVMSFAVPDRPREIRMEAAFFLQQLCQSSSLTLQMFIACRGIPVLVGFLEADYAKYREMVHLAIDGMWQVFKLQRSTPRNDFCRIAAKNGILLRLINTLYSLNEATRLASISVGVGFPVDGLAQRPRSGPLDLAHPISIQNDALLSSADQLDLPKVRHGIPDHHLEPLHASTSHPQRSDGNFSVDVDRLQPSNAVAEFTSEKSTNVASRESSKERDNVDRWKTDSSRADVELRQQRISNSASRASTDRASKLTEPTSNALSMAGAMQQEQVRPLLSLLEKEPPSRQISGQLEYVRQVSGLERHESVLPLLHASEKKTNGELDFLMAEFADVSQRGRENGNLDAGARVSYKAASKKPGALGSNEGAASTSGIVSQTASGVLSGSGVLNARPGSATSSGLLSHMVSSLNADVAREYLEKVADLLLEFAQADTTVKSYMCSQSLLSRLFQMFNRVEPQILLKILKCINHLSTDPNCLENLQRAEAIKYLIPNLQLKEGPLISQIHHEVLNALFSLCKINKRRQEQAAENGIIPHLMQFITSNSPLKQYALPLLCDMAHASRNSREQLRAHGGLDVYLNLLEDGTWSVTALDSIAVCLAHDNDNRKVEQALLKKDAVQRLVKFFQTCPEQHFVKILEPFLKIITKSVRINTTLAVNGLTPLLIARLDHRDAIARLNLLKLIKAVYEHHPQPKKLIVENDLPLKLQNLIEERRDGQSSGGQVLVKQMATSLLKALHINTVL 1214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4842g00004 1214 FunFam MAP3K epsilon protein kinase 1 386 600 - -
Pral4842g00004 1214 PANTHER ARMADILLO REPEAT-CONTAINING PROTEIN 3 468 1203 - -
Pral4842g00004 1214 Gene3D Transferase(Phosphotransferase) domain 1 1 101 - -
Pral4842g00004 1214 Gene3D - 864 1209 IPR011989 -
Pral4842g00004 1214 SMART arm_5 422 462 IPR000225 GO:0005515
Pral4842g00004 1214 SMART arm_5 994 1033 IPR000225 GO:0005515
Pral4842g00004 1214 MobiDBLite consensus disorder prediction 222 258 - -
Pral4842g00004 1214 MobiDBLite consensus disorder prediction 301 323 - -
Pral4842g00004 1214 MobiDBLite consensus disorder prediction 237 253 - -
Pral4842g00004 1214 SUPERFAMILY ARM repeat 875 1187 IPR016024 -
Pral4842g00004 1214 ProSiteProfiles Protein kinase domain profile. 1 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4842g00004 1214 SUPERFAMILY Protein kinase-like (PK-like) 5 83 IPR011009 -
Pral4842g00004 1214 MobiDBLite consensus disorder prediction 649 684 - -
Pral4842g00004 1214 MobiDBLite consensus disorder prediction 710 736 - -
Pral4842g00004 1214 FunFam MAP3K epsilon protein kinase 1-like 863 1209 - -
Pral4842g00004 1214 MobiDBLite consensus disorder prediction 271 326 - -
Pral4842g00004 1214 MobiDBLite consensus disorder prediction 99 130 - -
Pral4842g00004 1214 Pfam Protein kinase domain 6 82 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4842g00004 1214 MobiDBLite consensus disorder prediction 635 736 - -
Pral4842g00004 1214 Gene3D - 386 591 IPR011989 -
Pral4842g00004 1214 SUPERFAMILY ARM repeat 393 588 IPR016024 -
Pral4842g00004 1214 MobiDBLite consensus disorder prediction 685 709 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4842g00004 Pral-Chr4842 22856 42835 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4842g00004 1 1214 MAP Kinase Kinase Kinase AT3G13530 68.245 0.0 1597
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE-Pl Pral4842g00004 Pkinase 2.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4842g00004 - - pcin:129311394 2204.87