Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4842g00003 ATGGTGGTGATCATGCAGCAGCAGCAGAATCCATCTGCACTGGTGCCACAGCTCAACAACGATCCTCAGTCCTCCTCGGCCACCACCACCTCCTCCCTTAGGTCGCCGCCTTCTGCAACACCTCTACCCCAGTCCCAGTTATCTTCCTCACTCCCTCTTGTCGCCCCTCTCTCTGCTCCCCTCCGCCAAACGCATCTGCCATCGCTGCCACCCGATCATGTTATTGGACCAGTGGTGCCCATCTCCGCCACGCACCCTGCTGCTGAGCCGGCTTTGACAGCGCCGCCTGCCTGCCCGTTGCCTAGAGTCCGACTCTCGGATATTGCCCAATACGACGGAGCTCCATGTGGGTCCTATGTCAGAGCAGTGGAAGCACTGTCAGGGTCTTTGATGAGGCATAATGCTGCCTTGATCGAATTGGGCAGCGAGGATACTGCTCTGATGAGATGTGGATTGGAAGGTTCGAGACTGTTTTTTCGGAGCAGGGCCCATCTGGGTGGTGGGAAGGGAAGCCGTGGGGTTCACATGTACAGGGCAGGAAGGGCTTTGGAAGACTGGGATTCATCCCCCCCATGCATGACTGATATTTTTAGGTGCATGGGAAAGGCAGCTCGTTCTACTTTGTGTGCCATTGCAAGGCATCTTCGTCTTCGAAGCGATGTTTTTAACCATTTGCTTGATGATACCCCATTGCCTGCTAATGAGGTGTCCTCATCAGTTCTTGTTGCAACCTACTCACACGCTTCCTTGCCAAATGGAAAAGGTGCTATTGGAGGCGGTAAGCCAACCCTTAATGGTGAAATTGAGAAGGGTTTGTTGACATTGATATCTTCAGACGCTCCTGGTCTTCAGGTTTGTGACCCCAATGGCCGCTGGTATCTGGCAGATTGTGGATCTGGTCCAGGGGAACTTTTGTTGCTCACAGGCAAGGCACTTAGCCAAGCCACTGCAGGGCTTCGTCCTGCCGCATCATATAGAGCTTCTCCTGATTATTTTCTAGGCTCTAACAACGGAGGAAGGACATCTTTTGCGTTTAGGCTCATGCCACAGGGCAATGCTATATTGGACTGTTCTCCAATTGCAGCAGCTGGACATGTTATTCCCCAAAGCTATGTTCCAATATCAGTAAGCCAGTTTATGGATGACCTTTCTGCTGAAGAAGAAGTGATAGGCAGCCGATCTTATCATACTTATGTTGCTGGAAACAATGTGAATAAGGAACAATCATTGAGAAGTGTTCTGTCAGATCCTTTGTCTGGCGCATTCCTTGAAGATGCCATGCTTGTCTCATGTGGGCATTCATTTGGTGGTCTCATGCTAAGGAGAGTCATTGAAACTTCAAGATGTACTCTCTGCAATACAAATATTGAGACCAGTTCTCTGATCCCCAATTTTGCTCTAAGAGCAGCTGCCACAGCAGTGAAGCATGAGGATGACCGAAGGTTATTTCATAATGCTGTTCTCCGAAAGCGTCGGAAAGAAATGGGTGATCAAATGGATTCACTGAGAAGAATAAACAGGGAAAACGGAGACGTTACTGGTGATGATGGATCCAACCGGGGAGTACAGTATCCTTTTTCGGTAAATGAGAAGGTGATAATTAAGGGTAATAGGAGAACGCCAGAAAAATTCGTTGGTAAAGAAGCTGTCATTACATCTCAGTGTCTTAATGGCTGGTACTTGCTTAAGATTATTGGAACTGGGGAGAATGTGCGCTTGCAATACCGTTCTCTTAGGAAGCTATTCAACTCGCCAGCGATAGAGGACCAGTCACAGCCAATTCAAAATAGCAGCTCTTAA 1800 0.4894 MVVIMQQQQNPSALVPQLNNDPQSSSATTTSSLRSPPSATPLPQSQLSSSLPLVAPLSAPLRQTHLPSLPPDHVIGPVVPISATHPAAEPALTAPPACPLPRVRLSDIAQYDGAPCGSYVRAVEALSGSLMRHNAALIELGSEDTALMRCGLEGSRLFFRSRAHLGGGKGSRGVHMYRAGRALEDWDSSPPCMTDIFRCMGKAARSTLCAIARHLRLRSDVFNHLLDDTPLPANEVSSSVLVATYSHASLPNGKGAIGGGKPTLNGEIEKGLLTLISSDAPGLQVCDPNGRWYLADCGSGPGELLLLTGKALSQATAGLRPAASYRASPDYFLGSNNGGRTSFAFRLMPQGNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLSAEEEVIGSRSYHTYVAGNNVNKEQSLRSVLSDPLSGAFLEDAMLVSCGHSFGGLMLRRVIETSRCTLCNTNIETSSLIPNFALRAAATAVKHEDDRRLFHNAVLRKRRKEMGDQMDSLRRINRENGDVTGDDGSNRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKLFNSPAIEDQSQPIQNSSS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4842g00003 599 Gene3D - 171 388 IPR027443 -
Pral4842g00003 599 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 98 596 - -
Pral4842g00003 599 MobiDBLite consensus disorder prediction 1 47 - -
Pral4842g00003 599 SUPERFAMILY RING/U-box 410 476 - -
Pral4842g00003 599 SUPERFAMILY Clavaminate synthase-like 186 359 - -
Pral4842g00003 599 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 408 478 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4842g00003 Pral-Chr4842 8761 17034 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4842g00003 410 586 Plant U-box Gene Family AT5G05230 41.341 1.46e-39 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4842g00003 - - adu:107477161 909.057