Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4841g00006 ATGGGATTTGCGTTGACAACGTCTCGTCTTTTGTTTGTAATTGTTATCTCTGTACTCTCTGTCCAACTTGTTCGATCAAGAGATGACGATGCCCAAGCACTTTTAGCGCTCAAATCTTCTATTGATGTTCACAATACCCTTCCCTGGCCACCAGGAAGCAAAAATCTCTGCGACTGGGAAGGAGTCAGAGATTGCTTCAAGGGAAGAGTCCGAAAGCTAGTGCTGGAGAACTTGAACTTAACAGGTAATTTGGACCCAAAGATCTTGAGCCGATTGGATCAAATTCGAGTACTCAGTTTCAAGAGCAACTCACTGTCTGGTCTAATACCGGACCTCTCTTCCCTGGTCAATCTTAAATCCATATTTCTCAACGACAACAACTTCTCCGGCGACTTCCCTCCCTCCATCTCCGGTCTCCACCGCGTCAAAGTCATAGTTCTCTGTGGCAACCGACTCTCCGGCGATATCCCGTCGTCGCTGCTCAAACTCCGGCGCCTCTACATGCTTTACTTGCAAGACAACTTGTTCACAGGGCCCATCCCGAGTCTCAACCAAAGCAGTCTCCGATACCTGAACGTCTCCAACAACCAACTTTCCGGCAAGATCCCGGCGAGCCCAGCGTTGATCCGTTTCAATGAGTCGTCGTTTTCGGGGAACCCGGGCCTGTGTGGGGAACAAATCCACAAGGCATGCGAATTGCCTCCGTCGGTAAGCCCCAGCTATCCGTTGGTGCCAGGGAGGAGTGAGCCACGGCGGCGGTCGTCGTCGTCTAACCGAAAGAAAGTGATAAAGATAGTAGGAGGGGTCATCGGAGGCTTCGCGGTGCTCGTGATATGCTTGGTCGTAATATGTATGATGTGTAGGAATCGCAGAGAAGAGAAGGGTTCAGGACGCATGAAGAAAGGAGAAGAGGGGAGAGGAACAGAGGCGGAAACAGGAACGGGAGGTGAAAGTGGCAGAGGAGGTAATAATGGGGGAAAAGAAGGGGGGTTTTCATGGGAAGATGAGGGACTAGGGAAGTTGGTGTTCTGCGGGGCAGGGGATAGTTATAGGTTGGAGGATTTACTGAAGGCGTCGGCGGAGACACTGGGGAGGGGTAGTATGGGAAGTACATACAAGGCAGTGATGGAGTCAGGGTTTATAGTGACGGTGAAGAGATTGAAGGATGCGAGGCATCCTGGCTTGCAAGATTTCACAGCACGCATGGAGCTGCTAGGCAGGCTTAGGCACCCTAATCTGGTCCCACTTCGGGCTTATTTTCAGGCTAAGGAGGAACGCCTTCTTGTTTATGATTACTTCCCCAATGGAAGCCTCTTCTCTCTCGTCCATGGGTCAAAAACTTGTGGTGGGGGAAAGCCTCTTCACTGGACATCGTGCCTCAAAATTGCCGAAGACCTAGCAACTGGACTTGGGTACATCCACCAAAACCCTGGCTTAACCCATGGGAACCTGAAATCTTCTAATGTGTTGCTGGGTTCGGACTTCGAGTCATGTCTTACAGATTATGGTCTCCAAGTGTTGCTTAATCCAGATTCACTTGAAGAGCCCAGCGCCACCACTTTATTCTACAGAGCACCGGAGTGCCGTAGCATCGGAAGGCCTCCCACTCAGCAAGCCGATGTGTACAGCTTTGGGGTGCTTCTCCTGGAGCTTTTAACCGGGAAAACACCCTTCCAAGACCTTGTTCTGGAACATGGTTCGGATATACCTAGGTGGGTTCGGTCCGTGCGGGAAGAAGAGACGGAGTCCGGGTCCGGGGATGACCCCGCCTCAGGGAATGACGCCTCAGAAGAGAAGCTTCAGGCTCTTCTTAACATTGCAATGGCGTGTGTTTCACTGGTACCAGAAAACAGACCAACAATGAGGGAAGTTTTAAAGATGATAAGAGATGCAAGGGCCGAGGCTCAGGTGTCTTCAAACAGCAGCGATCATTCTCCGGGCAGATGGTCAGATACCGTGCAAAGCCTGCCTCGGGAAGAGCATTTGAGCATATAA 1995 0.5108 MGFALTTSRLLFVIVISVLSVQLVRSRDDDAQALLALKSSIDVHNTLPWPPGSKNLCDWEGVRDCFKGRVRKLVLENLNLTGNLDPKILSRLDQIRVLSFKSNSLSGLIPDLSSLVNLKSIFLNDNNFSGDFPPSISGLHRVKVIVLCGNRLSGDIPSSLLKLRRLYMLYLQDNLFTGPIPSLNQSSLRYLNVSNNQLSGKIPASPALIRFNESSFSGNPGLCGEQIHKACELPPSVSPSYPLVPGRSEPRRRSSSSNRKKVIKIVGGVIGGFAVLVICLVVICMMCRNRREEKGSGRMKKGEEGRGTEAETGTGGESGRGGNNGGKEGGFSWEDEGLGKLVFCGAGDSYRLEDLLKASAETLGRGSMGSTYKAVMESGFIVTVKRLKDARHPGLQDFTARMELLGRLRHPNLVPLRAYFQAKEERLLVYDYFPNGSLFSLVHGSKTCGGGKPLHWTSCLKIAEDLATGLGYIHQNPGLTHGNLKSSNVLLGSDFESCLTDYGLQVLLNPDSLEEPSATTLFYRAPECRSIGRPPTQQADVYSFGVLLLELLTGKTPFQDLVLEHGSDIPRWVRSVREEETESGSGDDPASGNDASEEKLQALLNIAMACVSLVPENRPTMREVLKMIRDARAEAQVSSNSSDHSPGRWSDTVQSLPREEHLSI 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4841g00006 664 ProSiteProfiles Protein kinase domain profile. 357 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4841g00006 664 SUPERFAMILY Protein kinase-like (PK-like) 361 628 IPR011009 -
Pral4841g00006 664 MobiDBLite consensus disorder prediction 635 664 - -
Pral4841g00006 664 MobiDBLite consensus disorder prediction 294 331 - -
Pral4841g00006 664 Pfam Protein kinase domain 360 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4841g00006 664 MobiDBLite consensus disorder prediction 294 310 - -
Pral4841g00006 664 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Pral4841g00006 664 MobiDBLite consensus disorder prediction 574 594 - -
Pral4841g00006 664 Gene3D Ribonuclease Inhibitor 185 233 IPR032675 -
Pral4841g00006 664 FunFam Nuclear pore complex protein NUP107 27 182 - -
Pral4841g00006 664 Gene3D Ribonuclease Inhibitor 27 184 IPR032675 -
Pral4841g00006 664 Pfam Leucine rich repeat N-terminal domain 28 63 IPR013210 -
Pral4841g00006 664 Gene3D Transferase(Phosphotransferase) domain 1 433 652 - -
Pral4841g00006 664 SUPERFAMILY L domain-like 29 224 - -
Pral4841g00006 664 ProSiteProfiles Leucine-rich repeat profile. 187 209 IPR001611 GO:0005515
Pral4841g00006 664 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 635 IPR046959 -
Pral4841g00006 664 Gene3D Phosphorylase Kinase; domain 1 349 432 - -
Pral4841g00006 664 MobiDBLite consensus disorder prediction 239 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4841g00006 Pral-Chr4841 23348 27357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4841g00006 5 664 Receptor kinase-like Gene Family AT1G60630 60.735 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral4841g00006 Pkinase 4.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4841g00006 - - gmx:100809866 907.901