Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4840g00078 ATGTCAGAGCTGAAATTAAGCCAAACAAGCACCGCCTCCATGGTTAGAATTCTCTCTTCTCACACCGTTATTCCTTCCGCGCCTACACCCTCTCTCACCTTACCTTCCTCCTTATGCGAGCAAATCAAGCTTTCCACTCACGAATCCCTCCTTTACGTTTACAAATCTAATATCCCTCGTCAGGATCTTCAACCCCACCACATTTTAATCACTTCTCTCAGCCAAACTCTGGTTCCTCACTATCCCCTTGCCGGCAGATTATTGTGTCGATCCGCCGCCGGAGGCGGTCGATGGGAACTCCATTGCAACGCCAAGGGAGCTCGCTTCTATCAAGCCTATTGTCACTCTACTTTGGATGATCTGGATGACTTTGTGTCTGCCCAGATCGTTCAAGAACTCATCCCAGACATTGACTATGGTTGTCCCATCGAACAAGTTCCCCTGCTGGCTGTGCAGCTCACCAGATTTTCATGTGGTGGCCTCACGATCGGGCTGGCCATGTGTCGCGCCGTTATTGACGGAATCGCAGCCATGCGTTTTATCAATTCATGGGCCAAGTTAGCCAGAGGAGAGCTTTTAGGTTCAACCGAAATGCCATTCAACGATCGAACAGCGCTAGATTCATGCGCACTGAATAAGACGCCACGTTTTGAACATTCCGAGTTTCACCCACCCCCACTTTGGGAAGGACGTGGCTTAGAAGGATCAGAACGCGAAACCAAGACGGCTGTTGTCGTTTTGAAGCTGACGATGGACCAAGTCAACAAACTGAAGAAGAAAGTCGGCGACTCTGCTTCACCTAATAAACGGCCATACAGTAGTTTCGAGGTGATCACGGGTCACGTATGGAGGTGCGTCAGCAAGGCACGTTATGCCGGCAACGACGACCAACCAACGAGGTTGTCGACGGTGGCCAACTGTAGAAACCGTCTGAAACCTCCATTACCTAGCGGTTATGCAGGGAACGTAGCTTTTCCAACTGTTACTTCAACCTGTTCTTTTCACGACCTCATGCATAAGCCTTTGAATTATGCGGTAGGGAATGTACGGGAAGCACTGGAGAGGCTAACGGACGAGTATGTGAGGTCTGTTCTTGATTACATTGAGAGGGAGAAAGAGGTGAATGCGGTGAGGTACAATTTTTACTACCCTGCGAGGAGTGTATATGATGGAGAATTCAGAGGGAATCCGAATTTGTTTGTGATTAGTTGGATGAATTTTTCATATCGTGAGGCGGATTTTGGGTGGGGAAAACCCGTTTATCTTGATCCAGGCTTCATGGATTCTGAAGGGATAGCTTTTGTTCTGGACAGCGCTGATGGTGATGGCGTCGTCGTCGCCATTTGTTTGCAGGCAATCCATATGGACGCTTTCAAGAGGTTGTTTTTCGAGGATATTGAGGGGGTCTTTCCTACCTCAAAGTTATAA 1428 0.4853 MSELKLSQTSTASMVRILSSHTVIPSAPTPSLTLPSSLCEQIKLSTHESLLYVYKSNIPRQDLQPHHILITSLSQTLVPHYPLAGRLLCRSAAGGGRWELHCNAKGARFYQAYCHSTLDDLDDFVSAQIVQELIPDIDYGCPIEQVPLLAVQLTRFSCGGLTIGLAMCRAVIDGIAAMRFINSWAKLARGELLGSTEMPFNDRTALDSCALNKTPRFEHSEFHPPPLWEGRGLEGSERETKTAVVVLKLTMDQVNKLKKKVGDSASPNKRPYSSFEVITGHVWRCVSKARYAGNDDQPTRLSTVANCRNRLKPPLPSGYAGNVAFPTVTSTCSFHDLMHKPLNYAVGNVREALERLTDEYVRSVLDYIEREKEVNAVRYNFYYPARSVYDGEFRGNPNLFVISWMNFSYREADFGWGKPVYLDPGFMDSEGIAFVLDSADGDGVVVAICLQAIHMDAFKRLFFEDIEGVFPTSKL 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4840g00078 475 Gene3D - 232 464 IPR023213 -
Pral4840g00078 475 Gene3D - 10 224 IPR023213 -
Pral4840g00078 475 Pfam Transferase family 14 460 - -
Pral4840g00078 475 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4840g00078 Pral-Chr4840 400074 401854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4840g00078 15 464 Monolignol Biosynthesis Gene Families AT5G48930 37.472 4.88e-90 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4840g00078 K13065 - gmx:100775549 516.153