Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4840g00055 ATGGCAGAAAAATTCTATCCCTCGAAGCTTTTGATTTTTGTGACACTTCTACTTTCTTTCAATCACTCAGAGCAACTGCAATCTTCACAGCCTCAGACTCTTCTAAGAATCAAACGGCTTTTGAACTTTCCTTCTGCTTTAAGTAGCTGGAATAGCAGCACAGACTTCTGCAGCCCTGACTCAGATTCTTCTCTTACTGTCGTATGCTATGAAGATACCATCACGCAGCTTCATATAATAGGTGAAAAGAGAGCTTCGCCACTTCCTAAAAATTTCTCAACAGAATCCTTTGTCGCAACACTAGCCAGGCTTCCTCATTTGAAAGTCCTCACACTGGTTTCTCTTGGCATCTGGGGTCCACTTCCGGGTAAGATTGCTCGATTGTCATCACTGGAAATAGTTAATATGAGTTCAAATTTTCTATATGGTGTCATCCCTCAGGAGCTTTCATTACTGTCAAATCTTCAAACACTCATCCTTGATGACAACATGTTTTCTGGGAAGCTTCCAGATTGGATTGATTCTCTTCCAGCCTTGACAGTGTTAAGTCTGAAAAACAATCTGTTCAATGGATCTGTACCTGATTCTTTGGGTAGCTTGGAAAATTTGAGAATTCTTTCACTTTCTCATAATCACTTTTATGGAGCAGTACCCGATTTAAGACATTTGACTAATCTTCAAGTGCTGGAATTGGATGATAATGCTTTTGGACCTCAGTTTCCTCGACTTGGCACCAAGTTGGTTACTCTAGTTCTAAGAAACAATAGTTTCAGATCCAGTGTCCCCGCTGAAGTGACCACGTTTCATCAGCTTGAGAGATTTGATATCTCATCAAACTCATTTGTGGGGCCATTCCACCCTGCATTGTTATCTCTTCCATCTATCATATATCTCAACATTTCTGGAAACCAACTCACTGGAATGCTTTTTGAAAATCTAACTTGCAGTTCTGAACTCCAAGTTGTGGATCTTTCCTCGAATCTGTTGACTGGAAGCTTACCTGGATGTTTGCAGTCAAAAAACAATGATAAGACTGTCCTTTATGCTAGAAATTGTCTGCAAGATATCAATCAAAATCAGCACTTACTCCCCTTTTGTCATACTGAAGCCCTAGCAGTGGGAATATTACCTGAGAGCAAGAAACACAAGGATCAATCTAAGGTTGGCCTTTCTCTTGGGATAGTGGGCGGCATTCTTGGAGTAGCAGCATTTGTTGCCTTGGTTTTCTCCATTAGTAGAAGAGGAAATGTCAAAAGCAACATTAAGAATTCCCCGACAAGATTAATATTAGAGAGTGCAACTCCCACATACTCATCTAAGCATCTTTCTGACGCAAGGTACATATCTCAAACAATGAAGTTGGCAACAGTTGGCCTGCCAGGTTATCGAACTTTCTCTCTGGAAGAGATTGTGGTAGCGACAAACAATTTTGATACATCTTCTTTCATGGGTGAAAGTTCTCAGGGACAGATGTACAGAGGCCGGCTGAGGCATGGTATTCTTGTTGCTATAAGATGCGTGAAAATGAAAAAAAGATACAGCATTCATTACTTTATGCACCACATAGAACTGATATCACAACTCAGGCATCGCCATCTAGTCTGTGCCCTAGGACACTGCTTTGAATATTATTTAGAAGATTCAACTGTCAGCAGAATATTTCTTGTCTTCGAATACGTTCCAAATGGCACACTAAGGAGCTGGATCTCAGATAGGCGCTCAAAAAAATCACTTGGTTGGACTCAACGCATAGGAGCTGCAATTGGAGTAGCAAAGGGCATTCAGTATCTACATACTGGTATTATCCCTGGTGTATATTCAAACAATCTCAAAACAACAGATGTTTTAATGGATCAGAATCTTGGTGCAAAAATCTGCAGTTATAACCTGCCCTTTTTATCAGACATGGGAAAGGTTGAGCACGGAACTTCCTCCAGCGGCTCCAAAAATCCTAGCGTTAATGAAAGTGCAAAACATGAAGATAAGTCAGATATATACGACTTTGGAGCAATACTACAGGAAATGATTCTGGGAAGGGCAGCGAAGTCAAGGAATGAAGCGGATGGCTTGAGGGTTCTGTTTCAAGCGAGCATAATAGGTGATGAAGAAGCTAGAAGGAGCATTGTAGATGCAGGAGTTCGCAAGTCATGCTTGGACCAATCGTTGAAGACGATGATGGAGATTTGCGCAAGGTGCCTTGCCAAAGATCCAGTGGAAAGGCCTTCCATCGAGGATGTTTTGTGGAATTTGCAGTTTGCTGCTCAAGTTCAGGATGCTTGGCGAGGGGAATCTCAAAGCAGTGAGGGATCTCCAGGCTCTCCTTTTGAACCTCGACGACTCACCTTCCATTAG 2352 0.4175 MAEKFYPSKLLIFVTLLLSFNHSEQLQSSQPQTLLRIKRLLNFPSALSSWNSSTDFCSPDSDSSLTVVCYEDTITQLHIIGEKRASPLPKNFSTESFVATLARLPHLKVLTLVSLGIWGPLPGKIARLSSLEIVNMSSNFLYGVIPQELSLLSNLQTLILDDNMFSGKLPDWIDSLPALTVLSLKNNLFNGSVPDSLGSLENLRILSLSHNHFYGAVPDLRHLTNLQVLELDDNAFGPQFPRLGTKLVTLVLRNNSFRSSVPAEVTTFHQLERFDISSNSFVGPFHPALLSLPSIIYLNISGNQLTGMLFENLTCSSELQVVDLSSNLLTGSLPGCLQSKNNDKTVLYARNCLQDINQNQHLLPFCHTEALAVGILPESKKHKDQSKVGLSLGIVGGILGVAAFVALVFSISRRGNVKSNIKNSPTRLILESATPTYSSKHLSDARYISQTMKLATVGLPGYRTFSLEEIVVATNNFDTSSFMGESSQGQMYRGRLRHGILVAIRCVKMKKRYSIHYFMHHIELISQLRHRHLVCALGHCFEYYLEDSTVSRIFLVFEYVPNGTLRSWISDRRSKKSLGWTQRIGAAIGVAKGIQYLHTGIIPGVYSNNLKTTDVLMDQNLGAKICSYNLPFLSDMGKVEHGTSSSGSKNPSVNESAKHEDKSDIYDFGAILQEMILGRAAKSRNEADGLRVLFQASIIGDEEARRSIVDAGVRKSCLDQSLKTMMEICARCLAKDPVERPSIEDVLWNLQFAAQVQDAWRGESQSSEGSPGSPFEPRRLTFH 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4840g00055 783 ProSiteProfiles Protein kinase domain profile. 477 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4840g00055 783 Gene3D Transferase(Phosphotransferase) domain 1 560 768 - -
Pral4840g00055 783 ProSiteProfiles Leucine-rich repeat profile. 202 224 IPR001611 GO:0005515
Pral4840g00055 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 560 766 - -
Pral4840g00055 783 SUPERFAMILY Protein kinase-like (PK-like) 457 752 IPR011009 -
Pral4840g00055 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 27 245 - -
Pral4840g00055 783 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 87 750 - -
Pral4840g00055 783 Gene3D Ribonuclease Inhibitor 27 241 IPR032675 -
Pral4840g00055 783 Pfam Leucine rich repeat 170 213 IPR001611 GO:0005515
Pral4840g00055 783 Pfam Leucine rich repeat N-terminal domain 29 58 IPR013210 -
Pral4840g00055 783 Pfam Protein tyrosine and serine/threonine kinase 482 747 IPR001245 GO:0004672|GO:0006468
Pral4840g00055 783 Gene3D Ribonuclease Inhibitor 242 360 IPR032675 -
Pral4840g00055 783 SUPERFAMILY L domain-like 30 353 - -
Pral4840g00055 783 Gene3D Phosphorylase Kinase; domain 1 448 559 - -
Pral4840g00055 783 MobiDBLite consensus disorder prediction 761 783 - -
Pral4840g00055 783 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 450 559 - -
Pral4840g00055 783 MobiDBLite consensus disorder prediction 641 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4840g00055 Pral-Chr4840 274937 279645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4840g00055 43 771 Miscellaneous Gene Families AT3G03770 61.853 0.0 870
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Pral4840g00055 PK_Tyr_Ser-Thr 5.1e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4840g00055 - - gmx:100807539 1112.06