Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4840g00051 | ATGAATTCGCCGGGGAGGAATAGGAGCATTTTGGTCTTGCCCACTAGCTCCCGCTCGGTGACCGAGACCGTCAATGGTTCGCATAACTTTGTAATCAAGGGCTACTCTCTCGCCAAAGGTATCGGCGTTGGTAAGCACATAGCTAGCGAGAATTTCACTGTCGGAGGTTTCCAGTGGGCCATTTATTTCTATCCGGACGGGAAGAATCCCGAGGATAATTCCACGTACGTTTCGGTGTTCATTGCGCTTGCGAGCGAGGGTACTGATGTGCGAGCACTGTTTGAGCTGACATTGGTGGACCAGAGTGGCAATGGAAAGCACAAAGTTCATAGCCACTTCGATCGATCGCTTGAAAGTGGGCCTTATACGCTCAAGTACAGGGGCAGCATGTGGGGCTATAAGCGTTTTTTCAAACGAGCTCAGCTGGAGGCGTCGACCTTCCTTAAAGATGACTGCTTGAAGATAAATTGTACTGTTGGTGTTGTGGTTTCATCCATAGATTGTTCAAAATTAAACAAAGTACATGTCCCTGAGTCTGATATTGGTTCACATTTTGGCATGCTATTAGAAAATGAGGAAGGATCAGACATTACATTCTCTGTTTCTGGGGAAAAGTTTCATGCACACAAGCTTGTATTGGCTGCTCGTTCTACTAAATTTGAGACAGAATTTTTCAATAAGATGGAGGAAGATGATCATGAAGTTGTTATTACTGATATGGAACCTAAGGTTTTCCGGGCACTGCTTCATTTTATTTATAAAGATACTCTTATAGAAGATGAAGAGCTCTTCATGTCATATTCTTCACTCTCATCAGTATCTGACACATTTGCTGCAAAGTTGTTAGCTGCTGCAGAAAAGTATGGCTTGCCAAGACTCAAACTGTTGTGTGAGTCCATACTTTGCAAAGACATTTCTATAAGTTCTGTTGCATGTATTTTGGCCCTTGCTGATCAATATCATGCCACAGAACTGAAGTCCATTTGTCTAAAATTTGCTGCTGAGAACCTTGTTGCTGTGATGCAATCTGATAGTTTCGAGTATCTTAAGGAGAACTGTCCATTGTTGCAATCAGAACTGCTAAAGACAGTGGCAGGGTGCGAAGATGAATTTAGTGGAGAGGGAAAATGTAGTGTGTGGGCCCAGTTTTCTGATGGCTGTGATACAAATGGAGTCGAACGAAGTCAAAATTTATGGGTTCAGCTTTCTGATGGTGTTAACAATAACAATAGGAGTCCAGGTGAAGAAGCTTCATGA | 1257 | 0.4304 | MNSPGRNRSILVLPTSSRSVTETVNGSHNFVIKGYSLAKGIGVGKHIASENFTVGGFQWAIYFYPDGKNPEDNSTYVSVFIALASEGTDVRALFELTLVDQSGNGKHKVHSHFDRSLESGPYTLKYRGSMWGYKRFFKRAQLEASTFLKDDCLKINCTVGVVVSSIDCSKLNKVHVPESDIGSHFGMLLENEEGSDITFSVSGEKFHAHKLVLAARSTKFETEFFNKMEEDDHEVVITDMEPKVFRALLHFIYKDTLIEDEELFMSYSSLSSVSDTFAAKLLAAAEKYGLPRLKLLCESILCKDISISSVACILALADQYHATELKSICLKFAAENLVAVMQSDSFEYLKENCPLLQSELLKTVAGCEDEFSGEGKCSVWAQFSDGCDTNGVERSQNLWVQLSDGVNNNNRSPGEEAS | 418 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4840g00051 | 418 | SMART | BTB_4 | 195 | 305 | IPR000210 | GO:0005515 | |
Pral4840g00051 | 418 | CDD | BTB_POZ_BPM_plant | 181 | 302 | - | - | |
Pral4840g00051 | 418 | SUPERFAMILY | POZ domain | 174 | 303 | IPR011333 | - | |
Pral4840g00051 | 418 | CDD | MATH | 26 | 159 | IPR002083 | GO:0005515 | |
Pral4840g00051 | 418 | FunFam | BTB/POZ and MATH domain-containing protein 4 | 24 | 163 | - | - | |
Pral4840g00051 | 418 | ProSiteProfiles | BTB domain profile. | 195 | 261 | IPR000210 | GO:0005515 | |
Pral4840g00051 | 418 | ProSiteProfiles | MATH/TRAF domain profile. | 25 | 159 | IPR002083 | GO:0005515 | |
Pral4840g00051 | 418 | PANTHER | BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 | 17 | 361 | IPR045005 | GO:0016567 | |
Pral4840g00051 | 418 | Pfam | BTB/POZ domain | 187 | 304 | IPR000210 | GO:0005515 | |
Pral4840g00051 | 418 | SUPERFAMILY | TRAF domain-like | 22 | 161 | - | - | |
Pral4840g00051 | 418 | FunFam | BTB-POZ and math domain 1 | 171 | 299 | - | - | |
Pral4840g00051 | 418 | SMART | math_3 | 30 | 142 | IPR002083 | GO:0005515 | |
Pral4840g00051 | 418 | CDD | BACK_AtBPM-like | 302 | 363 | IPR034090 | - | |
Pral4840g00051 | 418 | Gene3D | - | 304 | 376 | - | - | |
Pral4840g00051 | 418 | Gene3D | Potassium Channel Kv1.1; Chain A | 171 | 299 | IPR011333 | - | |
Pral4840g00051 | 418 | Gene3D | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 24 | 163 | IPR008974 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4840g00051 | Pral-Chr4840 | 262454 | 281551 | Tandem |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | TRAF | Pral4840g00051 | BTB | 1.7e-25 | CL0033 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4840g00051 | K10523 | - | gmx:100818306 | 714.916 |