Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4840g00033 ATGGAAGATCAAGGTGAGGGGCAACAGGAGACCAATACTCCGAACCAAGCCTCCGAGAGGAGCGAGCCGGTGAGGTCAAGGTGGACTCCCAAGCCTGAGCAAATCCTCATCCTTGAGTCCATCTTCAACAGTGGCATGGTCAATCCCCCCAAGGAGGAAACCATCCGCATCCGGAAGCTCCTCGAGAAGTTCGGTTCCGTCGGCGACGCAAACGTCTTCTATTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGCAGGCCTCCCTCGAGCAGCGAAACCAGCTTCAGCCTCAACTTGCCGGTGGCGGTGCAATTCCCTATGATCATCAACCTCACACCACCTCCCCTTCTGATCCTCTTCCTCCTGCTACTTCCGTGCCTTTTGCTGCGGCTTCTCCGTCTTTCCTTGATCTCTCCGGTTCGTCTTCTTCTTCTTGCGGCATGCTTGGCGGCCAAGAAGCCCTTGACGGTCTTTTCTCGGTGGCTTCTCAAATGGGTTTCCCCGAATTTGATCACACTTCGGCTGCTTCTTCAGCTCTATATCCTCCTCCATCTCATGCTTCCACCTTCAACTATCATTCTGGACTTATCACAGTGTTTATCAATGGAGTAGCAACGGAAGTTCCAAGGGGAACATTGGACATAAAAACAATGTTTGGGGAGGACGTAGTGTTAGTTCATTCCTCCGGGGTGCCACTTCCCACCAATGAGTTTGGTTTCCTGATGCAGAGCTTGCAGCATGGCGAAAGCTACTTTCTGGTCTCAAAGCCAACATGA 792 0.5341 MEDQGEGQQETNTPNQASERSEPVRSRWTPKPEQILILESIFNSGMVNPPKEETIRIRKLLEKFGSVGDANVFYWFQNRRSRSRRRQRQMQASLEQRNQLQPQLAGGGAIPYDHQPHTTSPSDPLPPATSVPFAAASPSFLDLSGSSSSSCGMLGGQEALDGLFSVASQMGFPEFDHTSAASSALYPPPSHASTFNYHSGLITVFINGVATEVPRGTLDIKTMFGEDVVLVHSSGVPLPTNEFGFLMQSLQHGESYFLVSKPT 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4840g00033 263 MobiDBLite consensus disorder prediction 84 129 - -
Pral4840g00033 263 PANTHER WUSCHEL-RELATED HOMEOBOX 11 7 262 IPR044558 GO:0003700|GO:0048830
Pral4840g00033 263 SMART HOX_1 23 90 IPR001356 GO:0003677
Pral4840g00033 263 MobiDBLite consensus disorder prediction 7 23 - -
Pral4840g00033 263 Pfam Homeodomain 25 85 IPR001356 GO:0003677
Pral4840g00033 263 SUPERFAMILY Homeodomain-like 20 92 IPR009057 -
Pral4840g00033 263 FunFam WUSCHEL-related homeobox 11 25 92 - -
Pral4840g00033 263 Gene3D - 23 93 - -
Pral4840g00033 263 MobiDBLite consensus disorder prediction 1 30 - -
Pral4840g00033 263 ProSiteProfiles 'Homeobox' domain profile. 21 86 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4840g00033 Pral-Chr4840 138192 139926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4840g00033 9 263 Wox Gene Family AT5G17810 49.091 2.32e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pral4840g00033 Homeodomain 2.7e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4840g00033 - - lang:109335690 309.301