Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral483g00081 ATGGGATCGGAAAACAAAGCGAGTAGAAGAAAAGACATTGAAGCAATGAAGAATCAAGGGTGTGAGGTTGAAGCGATAGGCATCAACTACAAGATCCGCACACAGAAAACAGAGCATCCTCTCAAAATCTTCAGCAAATTTCCAAAACAAATCGACCAAGAAAAAGAGCAGGAACCAGAAGAAGAAGAAGAAGCAAAACTTGAACAAGCATGCAGTGGGGGAGCGAGGCATGTCCTCAAGGATGTGAGCTGCCGAGCCATGCCGCAAGAAATTCTCGCCGTTGTTGGGCCAAGTGGAGCTGGAAAATCATCCCTGCTTGAGATTCTTGCTGGTAAAGTTTCCCCACAAAGTGGGTCCATCTTGGTTAACCAGAAACCTGTAGATAATGCTCTGTTCAGTAAGACTTCAGGGTATGTTACCCAAAATGATCTTCTGTTTCCCTTACTTACGGTTGAAGAAACCTTGATGTTTAGTGCAAAGCTAAGGCTAAAGCTTCCTCAAGATCAACTCTGCTGCAGAGTCAAGTCACTGATTCAGGAGCTAGGACTCAGCCACGTTGCTAAGACTCGAATTGGAGATAACAGGGCCCGTGGGATATCAGGTGGGGAAAAACGCCGAGTTTCAATTGGAGTTGAAGTTATACACGATCCCAAAGTGGTGATTCTTGACGAACCAACTTCTGGGCTTGACAGTACATCTGCTCTGCAGATCATTGAAATGCTAAAGGTCATGGCTGATTCGAGGGGCCGAACTATAATCCTAAGCATCCATCAACCTGGGTTCAGAATTGTAAAATTGCTCAATTCTATATTATTGTTAGCCAATGGCTCCGTGTTACACCATGGACCTGCGGATTTGCTGGGTGTCAATCTAAGATTAATGGGTTTAGAGCTTCCTCTTCATGTTAATGTTGTTGAATTTGCCATTGAGTCCATTGAATCCATTGAGAAACAGCAAAAGTGTCAGCGATTTCAATTACAAACTCCTCCAATATTACCAGCAACGATGCAGCAAAAGAAAGGTGATGTTCAAGGTGAGAGTAGAAGTGGTAAGTTTACTCTGCAGCAGCTCTTTCAACAATCAAAGGTAATTGATGAAGAAATAATCAACTCTGGAATGGATTTCACCTGTGATTTTGCAAATTCTAGATTGAAAGAAACTATGATTCTCAGCCACAGGTTCTTCAAAAACATCTTCCGCACAAAGGAGCTCTTTGCATGTAGGACGATCCAGATGCTGATTTCCGGACTCGTTTTGGGCTCCATCTTTTGTAATATCAAGGATGGCCTAGAGGGTGCTCAAGAAAGGGTAGGTTTATTTGCATTCATATTATCATTCTTATTATCAACGACCGTAGAAGCTCTGCCAATATTCCTGCAAGAAAGGGAGATTCTAATGAAGGAGACCTCTTGTGGAAGCTACAGAGTATCATCCTATGCAATTGCGAATGGCCTAGTTTACTTGCCATTCCTACTCATCCTAGCCATTTTATTCACGGTACCCTTATACTGGCTTGTTGGGCTTAACAGGAATTTCACAGCTTTTATGCACTTCCTGTGGCTCATTTGGTTAGTTCTTTACACGGCAAACTCAGTTGTGGTGTGTTTCAGTGCTCTGGTGCCTAATTTTATTGTGGGAAACTCAGTGATCGCTGGAGTCATTGGGTCATTCTTCTTGTTCTCTGGTTACTTCATATCAAAACAAGAAATTCCGAAATACTGGATTTTCATGCATTATATATCATTGTTTAAGTATCCCTTTGAAGGGCTTCTGATTAACGAGTTCTCCAACTCAGGTAAGTGCTTAGAGTACATGTTTGGGGCGTGTGTGATGACTGGCGAAGATGTGCTTAAAGAGGAAGGGTATGGGGGCGAAAGGAGTAAATGGAAGAATGTTGCGGTCATGTTGTGCTTCATCCTGTTTTACAGGCTGGTTTCCTATATAATTCTTAGATATAGATGCTCGCAGAGGACGTCCTAA 1980 0.4258 MGSENKASRRKDIEAMKNQGCEVEAIGINYKIRTQKTEHPLKIFSKFPKQIDQEKEQEPEEEEEAKLEQACSGGARHVLKDVSCRAMPQEILAVVGPSGAGKSSLLEILAGKVSPQSGSILVNQKPVDNALFSKTSGYVTQNDLLFPLLTVEETLMFSAKLRLKLPQDQLCCRVKSLIQELGLSHVAKTRIGDNRARGISGGEKRRVSIGVEVIHDPKVVILDEPTSGLDSTSALQIIEMLKVMADSRGRTIILSIHQPGFRIVKLLNSILLLANGSVLHHGPADLLGVNLRLMGLELPLHVNVVEFAIESIESIEKQQKCQRFQLQTPPILPATMQQKKGDVQGESRSGKFTLQQLFQQSKVIDEEIINSGMDFTCDFANSRLKETMILSHRFFKNIFRTKELFACRTIQMLISGLVLGSIFCNIKDGLEGAQERVGLFAFILSFLLSTTVEALPIFLQEREILMKETSCGSYRVSSYAIANGLVYLPFLLILAILFTVPLYWLVGLNRNFTAFMHFLWLIWLVLYTANSVVVCFSALVPNFIVGNSVIAGVIGSFFLFSGYFISKQEIPKYWIFMHYISLFKYPFEGLLINEFSNSGKCLEYMFGACVMTGEDVLKEEGYGGERSKWKNVAVMLCFILFYRLVSYIILRYRCSQRTS 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral483g00081 659 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 17 644 - -
Pral483g00081 659 Pfam ABC transporter 79 227 IPR003439 GO:0005524
Pral483g00081 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 285 IPR027417 -
Pral483g00081 659 FunFam ABC transporter G family member 5 63 324 - -
Pral483g00081 659 ProSitePatterns ABC transporters family signature. 199 213 IPR017871 GO:0005524|GO:0016887
Pral483g00081 659 Gene3D - 65 327 IPR027417 -
Pral483g00081 659 SMART AAA_5 88 306 IPR003593 GO:0016887
Pral483g00081 659 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 300 IPR003439 GO:0005524
Pral483g00081 659 Pfam ABC-2 type transporter 387 595 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral483g00081 Pral-Chr483 584728 587068 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral483g00081 84 329 Calmodulin-binding Proteins AT2G36910 25.194 9.79e-12 66.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral483g00081 K05681 - gmx:102665974 1031.55