Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral483g00077 ATGGGAAGTGAAAGGGTGAATCTTCCACCTGGCTTTGTCTTCTCTCCAACAGATGAAGAGCTAATCCTTCACTTTCTTTATCCCAAGGCTTTCCTTCTACCCTGCCATCCCAATATCATCCCTGACTTTGATCTCTCTCTCTTTCACCCTTTCCAACTCAGCGGAAAGGCGTTTTCTTGTGGAAACCAATTCTATTTTTTCTGCAAGTATAAGAAGAGAAGAGTGACAGAAAGTGGGTATTGGAAGGAAATAGGTGTGACTGAATCAGTAGTTTCAGCTGAAGGCAAGAAAGTTGGGATCAAGAAGTATTTAGTGTTCAAAAGTGGAGAAGCTCCCCATGGTACTGAAACCAGTTGGGCCATGCAAGAGTATCATCTTTGCTCTTCTGGGTTTAACATTCAAGGAAGCCCAAAACCTGATCATAAAAGTAAATGGGTGCTGTGCCGAGTCTATGAAAAGAAGATGGATTCTGAAGATGATGATGATGATGATGATGATGAAGGTGGAAGTACAGAGCTTTCATGGATGGATGAAATGTATATGTCGACGTTGGATGATGAAGAAGAAGAAGAAGAAGAAATTAGCTTCCCTAACTAG 597 0.4154 MGSERVNLPPGFVFSPTDEELILHFLYPKAFLLPCHPNIIPDFDLSLFHPFQLSGKAFSCGNQFYFFCKYKKRRVTESGYWKEIGVTESVVSAEGKKVGIKKYLVFKSGEAPHGTETSWAMQEYHLCSSGFNIQGSPKPDHKSKWVLCRVYEKKMDSEDDDDDDDDEGGSTELSWMDEMYMSTLDDEEEEEEEISFPN 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral483g00077 198 MobiDBLite consensus disorder prediction 181 198 - -
Pral483g00077 198 ProSiteProfiles NAC domain profile. 8 153 IPR003441 GO:0003677|GO:0006355
Pral483g00077 198 MobiDBLite consensus disorder prediction 155 198 - -
Pral483g00077 198 Gene3D NAC domain 17 157 IPR036093 GO:0003677|GO:0006355
Pral483g00077 198 SUPERFAMILY NAC domain 4 153 IPR036093 GO:0003677|GO:0006355
Pral483g00077 198 PANTHER NAC TRANSCRIPTION FACTOR 56 8 166 - -
Pral483g00077 198 MobiDBLite consensus disorder prediction 157 172 - -
Pral483g00077 198 Pfam No apical meristem (NAM) protein 9 126 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral483g00077 Pral-Chr483 569526 570322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral483g00077 4 156 NAC Transcription Factor Family AT5G39610 41.615 3.60e-33 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral483g00077 NAM 4.6e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral483g00077 - - adu:107470472 236.498