Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral483g00057 ATGGCTACGACAAAATTAATTCCTGGGTTTCGATTTCATCCGACTGATGTTGAGCTCCTTAGATACTTTCTGTGGAGGAAGGTTATGGGTAAGAAATTCCATTATGATGTGATCGCAGAAGTAGACATATACAAGTACGCTCCATGGGATCTCCCAGATAAATCTTATCTGAGAACTGGAGATTTGGAATGGTACTTCTTTTGCCCCAGAGAAAAGAAATATGCTAGTGGGGCCAGAATGAATCGCGCTACCGAAGTTGGGTACTGGAAAACTACAGGGAGGGATAGACCAGTTCATTTCAAGAATCGCGTTGTGGGAATGATAAAAACCCTGATATTTCACATAGGTAAAGCTCCCAAAGGAGATAGGACTGATTGGGTTATGCACGAATATAGGCTCGAAGATCAGGAGCTGACTGCGAAAGACATTCCTCAGGATTCCTATGTGCTTTGTAAGGTTTTCCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCTCAATATGGAAGACCATTCAATGATGAAGACTGGGATGACGACGAGGAAATGGATGGTGTAGGATCTCTTCCCTTAGTTGGTGTGCACGCACCAATTACCTTTCATCCTAACACGCCTGGCAGTTCTACAACAACTTATTGTCATCCCCCTGCAAGTGCATGTGTTGGATCATCACGAGCGTCATCTCTTGTGCATCCGTTAGCTCCAAGTGATCAAGTTATATCCAATGGGTCTCAAGTTCCAGTTAATGATGATATTAATGCCTTGCTGGATTGTTTCACAGAGAATGACACAGTTCCTATGATTGGAAATAACATTGAGCGGGCTTTTCAGCTTGGCAGAAACCATTCTTAG 849 0.4358 MATTKLIPGFRFHPTDVELLRYFLWRKVMGKKFHYDVIAEVDIYKYAPWDLPDKSYLRTGDLEWYFFCPREKKYASGARMNRATEVGYWKTTGRDRPVHFKNRVVGMIKTLIFHIGKAPKGDRTDWVMHEYRLEDQELTAKDIPQDSYVLCKVFQKEGPGPRNGAQYGRPFNDEDWDDDEEMDGVGSLPLVGVHAPITFHPNTPGSSTTTYCHPPASACVGSSRASSLVHPLAPSDQVISNGSQVPVNDDINALLDCFTENDTVPMIGNNIERAFQLGRNHS 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral483g00057 282 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Pral483g00057 282 FunFam Nac domain-containing protein 86 15 159 - -
Pral483g00057 282 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Pral483g00057 282 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 187 - -
Pral483g00057 282 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Pral483g00057 282 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral483g00057 Pral-Chr483 466088 469291 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral483g00057 1 273 NAC Transcription Factor Family AT5G09330 49.833 8.88e-98 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral483g00057 NAM 6.5e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral483g00057 - - adu:107470479 334.724