Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral483g00056 ATGGCTACGACAAAATTAATTCCTGGGTTTCGATTTCATCCGACTGATGTTGAGCTCCTTAGATACTTTCTGTGGAGGAAGGTTATGGGTAAGAAATTCCATTATGATGTGATCGCAGAAGTAGACATATACAAGTACGCTCCATGGGATCTCCCAGATAAATCTTATCTGAGAACTGGAGATTTGGAATGGTACTTCTTTTGCCCCAGAGAAAAGAAATATGCTAGTGGGGCCAGAATGAATCGCGCTACCGAAGTTGGGTACTGGAAAACTACAGGGAGGGATAGACCAGTTCATTTCAAGAATCGCGTTGTGGGAATGATAAAAACCCTGATATTTCACATAGGTAAAGCTCCCAAAGGAGATAGGACTGATTGGGTTATGCACGAATATAGGCTCGAAGATCAGGAGCTGACTGCGAAAGACATTCCTCAGGATTCCTATGTGCTTTGTAAGGTTTTCCAAAAGGAAGGTCCTGGTCCCAGGAATGGTGCTCAATATGGAAGACCATTCAATGATGAAGACTGGGATGACGACGAGGAAATGGATGGTGTAGGATCTCTTCCCTTAGTTGGTGTGCACGCACCAATTACCTTTCATCCTAACACGCCTGGCAGTTCTACAACAACTTATTGTCATCCCCCTGCAAGTGCATGTGTTGGATCATCACGAGCGTCATCTCTTGTGCATCCGTTAGCTCCAAGTGATCAAGTTATATCCAATGGGTCTCAAGTTCCAGTTAATGATGATATTAATGCCTTGCTGGATTGTTTCACAGAGAATGACACAGTTCCTATGATTGGAAATAACATTGAGAAGAATGATAATTCTGCTGTGGAGAAGGAAGCTGAAGGCATACCTTGTTTGGATGTTAATGATATATTTAAGGACTTGGGAGACCTTGACAATACAAACCAAATCTATCCTGCAGGAAGCATGCCCTTGTTGTTCGATGATCTGGATTTCTTGGAGTTGCGTGACCTAGACACCACTGAACCTGAAAGTGGGGTCCATTTCATCCGGAAAAAGGAGGGTTTGTGA 1041 0.4332 MATTKLIPGFRFHPTDVELLRYFLWRKVMGKKFHYDVIAEVDIYKYAPWDLPDKSYLRTGDLEWYFFCPREKKYASGARMNRATEVGYWKTTGRDRPVHFKNRVVGMIKTLIFHIGKAPKGDRTDWVMHEYRLEDQELTAKDIPQDSYVLCKVFQKEGPGPRNGAQYGRPFNDEDWDDDEEMDGVGSLPLVGVHAPITFHPNTPGSSTTTYCHPPASACVGSSRASSLVHPLAPSDQVISNGSQVPVNDDINALLDCFTENDTVPMIGNNIEKNDNSAVEKEAEGIPCLDVNDIFKDLGDLDNTNQIYPAGSMPLLFDDLDFLELRDLDTTEPESGVHFIRKKEGL 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral483g00056 346 FunFam Nac domain-containing protein 86 15 159 - -
Pral483g00056 346 Gene3D NAC domain 15 158 IPR036093 GO:0003677|GO:0006355
Pral483g00056 346 Pfam No apical meristem (NAM) protein 8 133 IPR003441 GO:0003677|GO:0006355
Pral483g00056 346 SUPERFAMILY NAC domain 4 156 IPR036093 GO:0003677|GO:0006355
Pral483g00056 346 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
Pral483g00056 346 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral483g00056 Pral-Chr483 466088 469866 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral483g00056 1 338 NAC Transcription Factor Family AT5G09330 44.932 8.58e-99 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral483g00056 NAM 1e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral483g00056 - - adu:107470479 361.303