Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral483g00044 ATGTTTGGCGTGCGTGGTTCTACTGGAATTGTTTCTGATGTTGTTTACCAGATTCGTCAAACTTTATCGCTTCATGGCGTACGAGCACAATATATAAACATTGGAGGTGGTGTTGGAGGCGAGATCCCTGACAACAAGCGCCTTCAATATGCCCTGCAGCGCATATATGGAATTGGCCGTTCTAAAGCTCACCATATTGTCTGTGAGCTTGGGGTTGAGAACAAATATGTCAAGGACCTAAGTAAGAGAGAGTTATATACCCTTCGAGAATTACTCTCCAAGTATCTGCTCGGAAATGACTTGAAAAGGTGTGTTGAGAAAGATATAGAAAGGTTGGTCAGTATTCAGTGCTACAGGGGTTTCAGACATGTGGATGGGTTACCCTGCAGAGGACAACGCACACATACAAATGCTCGCACCCGGAAGAGCAGACCTGGTTTTGCTGCATCAGGATCTGTTCAGTAG 465 0.4516 MFGVRGSTGIVSDVVYQIRQTLSLHGVRAQYINIGGGVGGEIPDNKRLQYALQRIYGIGRSKAHHIVCELGVENKYVKDLSKRELYTLRELLSKYLLGNDLKRCVEKDIERLVSIQCYRGFRHVDGLPCRGQRTHTNARTRKSRPGFAASGSVQ 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral483g00044 154 ProSitePatterns Ribosomal protein S13 signature. 119 132 IPR018269 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pral483g00044 154 ProSiteProfiles Ribosomal protein S13 family profile. 38 143 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pral483g00044 154 Pfam Ribosomal protein S13/S18 39 140 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pral483g00044 154 Hamap 30S ribosomal protein S13 [rpsM]. 31 150 IPR001892 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Pral483g00044 154 Gene3D 30s ribosomal protein s13, domain 2 103 142 IPR027437 -
Pral483g00044 154 PANTHER 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 30 142 - -
Pral483g00044 154 Gene3D - 38 102 - -
Pral483g00044 154 FunFam 30S ribosomal protein S13 38 103 - -
Pral483g00044 154 MobiDBLite consensus disorder prediction 132 154 - -
Pral483g00044 154 FunFam Ribosomal protein S13 103 142 - -
Pral483g00044 154 SUPERFAMILY S13-like H2TH domain 39 143 IPR010979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral483g00044 Pral-Chr483 380014 383251 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral483g00044 46 143 Cytoplasmic Ribosomal Protein Gene Family AT4G09800 30.328 1.42e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral483g00044 K02952 - gmx:100527465 232.646