Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral483g00043 ATGACCACTCCTCCCGGGAAACCACAATCCTCCTTCTTTCGGCCCAAATCTTCTTTCCTCCTGTTTTCCATGGCTTCGCTTCTTTCTCTTTCCCTTCTCTCCCTCTTCCTCTTCCTTTCTCTCTCCTCCGCCGCTCGCCACCACCAGAAACCACCCGTCACCTCCCCCTCCTCCGGCTCTTCTGCTGTCGTCCAGAACGCTTGCAAGGCCACTCGCTTCCCTGAACAATGCCAATCTTCTCTAACCAAACTCCCTTCAGATCCCACTCCAGTTCAAATCCTCCAATCCGCCTTGTCGGTGTCGTCGGAGAACCTCAAGACGGCGCAATCCATGGTCAAGTCCATCCTAGACTCATCGGCATCCAGCGTCAACCGCACCACCGCTTGCAAGGTCTGCATGGAGGTGCTCCGTCTCTCCGACTACCGCATCGGTATGGCCAATGACGCGCTGCCGCGTGGCAGGAACAAGGACGCTCGCGCATGGATGAGCGCCGCCCTGCTCTACCAGTACGACTGCTGGTCCGCTCTGAAGTACGCCAACGATACTCGCCAGGTCGGTGAGGCGATGGCCTTCTTGGACTCACTTACCAGGATCTCCAGCAACGCGTTGAGCATGATGGCGTCGTACGACGTCGTTGGAAAAGACATTGCGTCGTGGAGGCCACCTTTAACGGAGCGCAATGGGTTCTGGGAGGGATCCAGGTCGGGTTCTGGGTCGTTGGGTTTCAGGGGTGGGTTTCCGGCGAAAGTGAAGCCGGATGCTACAGTGTGTAAGGATGGAGGGAATGGGTGTTACAAGACGGTGCAGGAGGCTGTTAACGCTGCTCCGGAAAACGCGGGTGACAAGAAATTTGTGATATACATAAAGGGAGGTGTTTATGAAGAGACTGTTAGGGTTCCGTTGGAGAAGAAGAACGTGGTGTTTTATGGGGACGGAATGGGGAAGACCATCATCACTGGGTCTGCTCAAGCGGATCAACCGGGAATGACGACATACCTTTCAGCTACTGTTGCTGTTCTGGGTGATGGATTCATGGCCAAGGCTCTCACAATCCAGAACACAGCAGGCCCTGTCGCTCATCAAGCAGTAGCCTTAAGATCAGACAGCGATTTCTCTGTGTACGAAGAATGTGAATTCATAGGCAATCAAGACACACTCTATGCTCACTCCCTTCGCCAATTTTACAAATCATGCCGCATGCTGGGCAATGTAGACTTCATCTTTGGCAACTCTGCTTCCATCTTCCAAGACTGCCAAATCCTAGTCCGGCCCCGACAAGTGAAGCCGGAGAGCGGCGAGAACAATGCTGTCACTGCACATGGCAGAACAGACCCTGCTCAAACCACTGGCTTTGTTTTCATCAACTGCTTGATCAATGGGACCAAGGAGTACATGGATTTGTACCATAGGAAGCCTCAGAAGCACAAGAACTACTTGGGGAGGCCATGGAAGGAGTACTCAAGAACAGTGTATATTAACTCATTCTTAGAAGCTCTGATAACGCCCACTGGCTGGTTGCCATGGGGTGGTGATTTTGCACTTAAGACGCTTTACTATGGAGAATATGCCAACACAGGACCTGGCTCTGATCTGAGTCAGAGAGTACCATGGAGTAGTAAGGTCCCACCTGAGCACATATCTGCATATTCAGTTCAGAATTTCATCCAAGGAGATGAGTGGATTGCATCATCCATGATTAGCTCGTTAGATTTGTCATAG 1719 0.5212 MTTPPGKPQSSFFRPKSSFLLFSMASLLSLSLLSLFLFLSLSSAARHHQKPPVTSPSSGSSAVVQNACKATRFPEQCQSSLTKLPSDPTPVQILQSALSVSSENLKTAQSMVKSILDSSASSVNRTTACKVCMEVLRLSDYRIGMANDALPRGRNKDARAWMSAALLYQYDCWSALKYANDTRQVGEAMAFLDSLTRISSNALSMMASYDVVGKDIASWRPPLTERNGFWEGSRSGSGSLGFRGGFPAKVKPDATVCKDGGNGCYKTVQEAVNAAPENAGDKKFVIYIKGGVYEETVRVPLEKKNVVFYGDGMGKTIITGSAQADQPGMTTYLSATVAVLGDGFMAKALTIQNTAGPVAHQAVALRSDSDFSVYEECEFIGNQDTLYAHSLRQFYKSCRMLGNVDFIFGNSASIFQDCQILVRPRQVKPESGENNAVTAHGRTDPAQTTGFVFINCLINGTKEYMDLYHRKPQKHKNYLGRPWKEYSRTVYINSFLEALITPTGWLPWGGDFALKTLYYGEYANTGPGSDLSQRVPWSSKVPPEHISAYSVQNFIQGDEWIASSMISSLDLS 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral483g00043 572 Gene3D - 247 569 IPR012334 -
Pral483g00043 572 NCBIfam pectinesterase inhibitor domain 29 206 IPR006501 GO:0004857
Pral483g00043 572 Pfam Pectinesterase 253 558 IPR000070 GO:0030599|GO:0042545
Pral483g00043 572 CDD PMEI-like_3 67 210 - -
Pral483g00043 572 FunFam Probable pectinesterase/pectinesterase inhibitor 51 62 208 - -
Pral483g00043 572 Pfam Plant invertase/pectin methylesterase inhibitor 63 205 IPR006501 GO:0004857
Pral483g00043 572 SMART PMEI_2 59 205 IPR006501 GO:0004857
Pral483g00043 572 Gene3D Invertase/pectin methylesterase inhibitor family protein 59 208 IPR035513 -
Pral483g00043 572 PANTHER PECTINESTERASE 38 562 - -
Pral483g00043 572 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 63 206 IPR035513 -
Pral483g00043 572 FunFam Pectinesterase 247 570 - -
Pral483g00043 572 SUPERFAMILY Pectin lyase-like 251 565 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral483g00043 Pral-Chr483 372655 375430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral483g00043 55 564 Carbohydrate Esterase AT5G09760 66.085 0.0 718
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral483g00043 - - qsa:O6P43_023358 798.89