Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral483g00028 ATGAGTGTGGCGAAGGCAGGAAGCTCAGGGGAGTGTAATGGGGGCGCAGAGCCTCCTGATCCTGATATTCTTGAAATTGACCCAACTTGTCGCTACATTAGGTATAAAGATGTGATCGGCAAAGGTGCTTTCAAGACATGTTATAGGGCATTTGATGAAGTCAGTGGACTTGAAGTGGCCTGGAACCAGGTTCGGATTGATGAGGTGCTGCAGTCACCCGGTGACTTGGAAAGGCTCTACTCAGAGGTGCATCTCTTAAAGTCACTGACAAACAACAACATTGTAAAATTCTACAATTCCTGGATTGATGATAAGAACAAGACTGTCAACATCATTACTGAATTGTTCTCCTCGGGCAGCCTCAGACAGTATCGTAGGAAGCACAAGAAGGTTGACATGAAGGCTCTCAAAGGATGGGCAAGACAGATTTTGATGGGTTTAAACTACCTCCATAATCACAACCCACCTATTATACATAGGGATCTGAAGTGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGAGATTTGGGGCTGGCAACTTTCTTGGAACGGACTAATGCTGAGAGTGTGATTGGAACCCCTGGATTTATGGCACCTGAGCTGTATGATGAAAATTACAATGAATTGGCCGACATATATTCTTTTGGAATGTGCATGCTTGAGTTGGTGACTTCTGAATACCCATATAGTGAATGTAAAAACTCAGCTCAGATATACAAGAAGGTTTCATCGGGTATAAAACCTGCTTCACTTTCTAAAGTCAAAGATCCAGAAATGAAATTATTTATTGACAAATGTCTAGTCCCAGCGTCTCAAAGAATGTCGGCAAAGGAGCTTCTAATGGACCCTTTCCTTCAAATTAATAGTTTGGCAAGAAATCGTCGTCTATCATTACCCGATATTGTTATCCCTAAATTTGGAGCCTTTGGAGATCGTATTCTTGTTTCAGAAGGCCCTGCTACTCAACGTAATGGATCAAATTCTCTGGATCTTGATGAGACTTGTGAATTACCTGTGATCACTATATATGATGGTTCCGGTGATGCTTCACATTCTCCATGTGTTGAGATACGGAAGTCGAAGAGAGGTGATATTTTCACTCTAAAAGGTGAAGAAAGTGATGAGAATTCTGTATCAATAGTTCTTCGGATAGCTGATCAAGGCGGTCGAGCGAGAAATATTCATTTCCTATTCTACCTTGATAGTGATACTGCTATTTCCGTTTCAAGTGAAATGGTTGAGCAACTCGAACTTTCAGATCAAAATGTACAGCTCATAGCTGAGTTGATAGACTTGTTATTGATTAATTTGGTTCCCAATTGGAAACCTTGTGTAGATATTGCTCACTTGGTTTCACGAAGTTGTAAAAGAACTATTGCTGGAGAAAAAGATTTGGAATCGGCAAAACTAAAACAACTTTATGAAGATTCCATGCAAAATATTACTGAAGAGAGAGGTATCTCACACTCAATCAGAAGGTCAGTTTCATCAGAAATCCATTATCACTCTAACTTGGGTGAATTTTCATCCCCTGCCAACATAGATGTGGGAAATACAATTAAAATAGATGATTTGTGTTCTAAGATTTCACGTGTTTCTATAACATCTGACGTTAACGATAAGAAGTTGTCTTTAGTTTCATTTTTATCGGTGGAGTCAGCATTTAATGACTTCAACTTGTCGAGAGTACCAGGTGAATCTGAGTGCTCTTTTATATCTACAATGGAAGCATGGCCTGATACTCGTAGAAGTAAGACTTCAGAATTAGGAAGTCATGATATGTTGAACTTCCCAACCCATTCTAGTAGTCCTTCTTTATCTAATGTAGAAGATGGGTTGAAAATAGAGTTAGATATAATTGAACAGAAATACTTAGAGACAATTAAGGAAGCATCAAGAATAAGATCTCAAGCCATCATGGAGGCCAGAAGAAGGTCATTACAGAAGAAGATCTAA 1971 0.3912 MSVAKAGSSGECNGGAEPPDPDILEIDPTCRYIRYKDVIGKGAFKTCYRAFDEVSGLEVAWNQVRIDEVLQSPGDLERLYSEVHLLKSLTNNNIVKFYNSWIDDKNKTVNIITELFSSGSLRQYRRKHKKVDMKALKGWARQILMGLNYLHNHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERTNAESVIGTPGFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECKNSAQIYKKVSSGIKPASLSKVKDPEMKLFIDKCLVPASQRMSAKELLMDPFLQINSLARNRRLSLPDIVIPKFGAFGDRILVSEGPATQRNGSNSLDLDETCELPVITIYDGSGDASHSPCVEIRKSKRGDIFTLKGEESDENSVSIVLRIADQGGRARNIHFLFYLDSDTAISVSSEMVEQLELSDQNVQLIAELIDLLLINLVPNWKPCVDIAHLVSRSCKRTIAGEKDLESAKLKQLYEDSMQNITEERGISHSIRRSVSSEIHYHSNLGEFSSPANIDVGNTIKIDDLCSKISRVSITSDVNDKKLSLVSFLSVESAFNDFNLSRVPGESECSFISTMEAWPDTRRSKTSELGSHDMLNFPTHSSSPSLSNVEDGLKIELDIIEQKYLETIKEASRIRSQAIMEARRRSLQKKI 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral483g00028 656 MobiDBLite consensus disorder prediction 1 20 - -
Pral483g00028 656 Pfam Protein kinase domain 36 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral483g00028 656 Gene3D - 381 471 - -
Pral483g00028 656 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Pral483g00028 656 ProSiteProfiles Protein kinase domain profile. 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral483g00028 656 SMART serkin_6 33 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral483g00028 656 SUPERFAMILY Protein kinase-like (PK-like) 35 291 IPR011009 -
Pral483g00028 656 Gene3D Transferase(Phosphotransferase) domain 1 116 296 - -
Pral483g00028 656 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Pral483g00028 656 FunFam probable serine/threonine-protein kinase WNK9 116 295 - -
Pral483g00028 656 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 19 513 - -
Pral483g00028 656 CDD STKc_WNK 31 290 - -
Pral483g00028 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral483g00028 Pral-Chr483 264839 268696 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral483g00028 133 456 MAP Kinase Kinase Kinase AT1G49160 69.136 3.74e-166 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral483g00028 Pkinase 5.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral483g00028 K08867 - qsu:112016416 776.933