Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral483g00027 ATGAGTGTGGCGAAGGCAGGAAGCTCAGGGGAGTGTAATGGGGGCGCAGAGCCTCCTGATCCTGATATTCTTGAAATTGACCCAACTTGTCGCTACATTAGGTATAAAGATGTGATCGGCAAAGGTGCTTTCAAGACATGTTATAGGGCATTTGATGAAGTCAGTGGACTTGAAGTGGCCTGGAACCAGGTTCGGATTGATGAGGTGCTGCAGTCACCCGGTGACTTGGAAAGGCTCTACTCAGAGGTGCATCTCTTAAAGTCACTGACAAACAACAACATTGTAAAATTCTACAATTCCTGGATTGATGATAAGAACAAGACTGTCAACATCATTACTGAATTGTTCTCCTCGGGCAGCCTCAGACAGAAGCACAAGAAGGTTGACATGAAGGCTCTCAAAGGATGGGCAAGACAGATTTTGATGGGTTTAAACTACCTCCATAATCACAACCCACCTATTATACATAGGGATCTGAAGTGTGATAATATATTTATCAATGGAAACCAAGGTGAAGTTAAAATTGGAGATTTGGGGCTGGCAACTTTCTTGGAACGGACTAATGCTGAGAGTGTGATTGGAACCCCTGGATTTATGGCACCTGAGCTGTATGATGAAAATTACAATGAATTGGCCGACATATATTCTTTTGGAATGTGCATGCTTGAGTTGGTGACTTCTGAATACCCATATAGTGAATGTAAAAACTCAGCTCAGATATACAAGAAGGTTTCATCGGGTATAAAACCTGCTTCACTTTCTAAAGTCAAAGATCCAGAAATGAAATTATTTATTGACAAATGTCTAGTCCCAGCGTCTCAAAGAATGTCGGCAAAGGAGCTTCTAATGGACCCTTTCCTTCAAATTAATAGTTTGGCAAGAAATCGTCGTCTATCATTACCCGATATTGTTATCCCTAAATTTGGAGCCTTTGGAGATCGTATTCTTGTTTCAGAAGGCCCTGCTACTCAACGTAATGGATCAAATTCTCTGGATCTTGATGAGACTTGTGAATTACCTGTGATCACTATATATGATGGTTCCGGTGATGCTTCACATTCTCCATGTGTTGAGATACGGAAGTCGAAGAGAGGTGATATTTTCACTCTAAAAGGTGAAGAAAGTGATGAGAATTCTGTATCAATAGTTCTTCGGATAGCTGATCAAGGCGGTCGAGCGAGAAATATTCATTTCCTATTCTACCTTGATAGTGATACTGCTATTTCCGTTTCAAGTGAAATGGTTGAGCAACTCGAACTTTCAGATCAAAATGTACAGCTCATAGCTGAGTTGATAGACTTGTTATTGATTAATTTGGTTCCCAATTGGAAACCTTGTGTAGATATTGCTCACTTGGTTTCACGAAGTTGTAAAAGAACTATTGCTGGAGAAAAAGATTTGGAATCGGCAAAACTAAAACAACTTTATGAAGATTCCATGCAAAATATTACTGAAGAGAGAGGTATCTCACACTCAATCAGAAGGTCAGTTTCATCAGAAATCCATTATCACTCTAACTTGGGTGAATTTTCATCCCCTGCCAACATAGATGTGGGAAATACAATTAAAATAGATGATTTGTGTTCTAAGATTTCACGTGTTTCTATAACATCTGACGTTAACGATAAGAAGTTGTCTTTAGTTTCATTTTTATCGGTGGAGTCAGCATTTAATGACTTCAACTTGTCGAGAGTACCAGGTGAATCTGAGTGCTCTTTTATATCTACAATGGAAGCATGGCCTGATACTCGTAGAAGTAAGACTTCAGAATTAGGAAGTCATGATATGTTGAACTTCCCAACCCATTCTAGTAGTCCTTCTTTATCTAATGTAGAAGATGGGTTGAAAATAGAGTTAGATATAATTGAACAGAAATACTTAGAGACAATTAAGGAAGCATCAAGAATAAGATCTCAAGCCATCATGGAGGCCAGAAGAAGGTCATTACAGAAGAAGATCTAA 1962 0.3909 MSVAKAGSSGECNGGAEPPDPDILEIDPTCRYIRYKDVIGKGAFKTCYRAFDEVSGLEVAWNQVRIDEVLQSPGDLERLYSEVHLLKSLTNNNIVKFYNSWIDDKNKTVNIITELFSSGSLRQKHKKVDMKALKGWARQILMGLNYLHNHNPPIIHRDLKCDNIFINGNQGEVKIGDLGLATFLERTNAESVIGTPGFMAPELYDENYNELADIYSFGMCMLELVTSEYPYSECKNSAQIYKKVSSGIKPASLSKVKDPEMKLFIDKCLVPASQRMSAKELLMDPFLQINSLARNRRLSLPDIVIPKFGAFGDRILVSEGPATQRNGSNSLDLDETCELPVITIYDGSGDASHSPCVEIRKSKRGDIFTLKGEESDENSVSIVLRIADQGGRARNIHFLFYLDSDTAISVSSEMVEQLELSDQNVQLIAELIDLLLINLVPNWKPCVDIAHLVSRSCKRTIAGEKDLESAKLKQLYEDSMQNITEERGISHSIRRSVSSEIHYHSNLGEFSSPANIDVGNTIKIDDLCSKISRVSITSDVNDKKLSLVSFLSVESAFNDFNLSRVPGESECSFISTMEAWPDTRRSKTSELGSHDMLNFPTHSSSPSLSNVEDGLKIELDIIEQKYLETIKEASRIRSQAIMEARRRSLQKKI 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral483g00027 653 MobiDBLite consensus disorder prediction 1 20 - -
Pral483g00027 653 SUPERFAMILY Protein kinase-like (PK-like) 35 288 IPR011009 -
Pral483g00027 653 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 19 510 - -
Pral483g00027 653 CDD STKc_WNK 31 287 - -
Pral483g00027 653 FunFam Probable serine/threonine-protein kinase WNK1 18 114 - -
Pral483g00027 653 Gene3D Transferase(Phosphotransferase) domain 1 117 293 - -
Pral483g00027 653 ProSiteProfiles Protein kinase domain profile. 33 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral483g00027 653 Gene3D Phosphorylase Kinase; domain 1 19 114 - -
Pral483g00027 653 Coils Coil 646 653 - -
Pral483g00027 653 FunFam probable serine/threonine-protein kinase WNK9 116 292 - -
Pral483g00027 653 SMART serkin_6 33 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral483g00027 653 Gene3D - 378 468 - -
Pral483g00027 653 Pfam Protein kinase domain 36 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral483g00027 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral483g00027 Pral-Chr483 264838 268696 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral483g00027 130 453 MAP Kinase Kinase Kinase AT1G49160 69.136 4.75e-166 480
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pral483g00027 Pkinase 5.8e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral483g00027 K08867 - qsu:112016416 766.148