Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral483g00012 ATGTTAGAGAACTCGACTTCGAGTTTACCCGAAAACTCCATTCAACAGCGGAGGCACGCAGAGGAGGATGGTGGTAAGCCTGTCTCTGATGGACACCAAGACGAAGACGTTGACCGGAATGTCACCGGTGGCCGGTGGCCTCCAGAAGAGACTAAAGCTTTGCTCCAGATAAGGTCTGACATGGACGCTGATTTCAGGGATACCTTACCCAAAGTTCATCTTTGGCAACAAGTTTCCAGGAGATTACGGGGGCTAGGATATAATAGGAGTGCTAAGAAGTGCCAGGAGAAGTTTGAAAACGTGTACAAGTACTACAGAAGGACCAAGGAAGGTCGTTATGGCCCCAACGGCAAGACTTACCGATTCTTTGAGCTTTTAGAGCCTCTTATGAACTCTCCTTACCCTGAAAAGGATGAAGAACAAGCGAGAAATACAAACAGGCGGAAAACATATAGCCACAACACTACCCCAATGGATTTGTCCAATGTTATTCAAGATTCATTCCCATTTTCCATTCGGTTCTCTAGTGCCCCCTCTAGTTCAACTACTCCCTCTTCGAGCGAAGAATCAGAGGAAGACATTCGAAAGAAGAAAAGGAAACTGACGAAGTGTTGGGGGTTGATGAACAAAGTACTAGAGAGGCAAGTGGAGCTACAGAAGAACTTTATGGAGGTTTTAGTCAAATGCGAACAAGAGAGAATGGCAAGAGAGGAAGCATGGAAGATGCAGGAATTAGCTAGGATTAAGAGGGAACGAGAGCTTTTAGCTCAGGAAAGATCAATTGCTGCGGCAAAAGATGCAGCAGTGCTTGCCCTTCTGAGTAAGTTCACAGGACAAACGGGGACCATAGAATTACCTGAGAATCTACTTCCTAACGATTTAGATAAGGACGAGCAAGAAAATGATAATGCAGGCAGTAGTGTTCTTGAAAAGCAAGAATGTAGAAATGGTGGGAATTTCACACTGACGAGTCCATCTTCCTCTAGATGGCCCAAAGATGAAGTGGAAGCTTTCATTAGATTGAGGACAAACTTGGATGTGGAGAATGAAGGAAATGGGCTTAAAGGGTCTAATCCTATATGGGAGGAGATATCTTGTGCAATGAAGAAACTTGGGTACGATCGGAGTGCCAGGAGATGCAAGGAGAAATGGGAGAATATGAACAAATACTTCAAGAGGATGAAGAAAAAACCAGAAAAAGCCTCAGAGTCAGAGTCTAAAACATGTCCTTATTTTCATCAGTTGGATGCTCTGTATAATAGTGAAAGGCCTAATGAGAAGTTGGAGGATTCAGCCAGTTCT 1302 0.4416 MLENSTSSLPENSIQQRRHAEEDGGKPVSDGHQDEDVDRNVTGGRWPPEETKALLQIRSDMDADFRDTLPKVHLWQQVSRRLRGLGYNRSAKKCQEKFENVYKYYRRTKEGRYGRXNGKTYRFFELLEPLMNSPYPEKDEEQARNTNRRKTYSHNTTPMDLSNVIQDSFPFSIRFSSAPSSSTTPSSSEESEEDIRKKKRKLTKCFXGLMNKVLERQVELQKNFMEVLVKCEQERMAREEAWKMQELARIKRERELLAQERSIAAAKDAAVLALLSKFTGQTGTIELPENLLPNDLDKDEQENDNAGSSVLEKQECRNGGNFTLTSPSSSRWPKDEVEAFIRLRTNLDVENEGNGLKGSNPIWEEISCAMKKLGYDRSARRCKEKWENMNKYFKRMKKKPEKASESESKTCPYFHQLDALYNSERPNEKLEDSASS 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral483g00012 436 MobiDBLite consensus disorder prediction 134 148 - -
Pral483g00012 436 FunFam Trihelix transcription factor GT-2 332 395 - -
Pral483g00012 436 Gene3D - 46 107 - -
Pral483g00012 436 Gene3D - 332 395 - -
Pral483g00012 436 ProSiteProfiles Myb-like domain profile. 330 390 IPR001005 -
Pral483g00012 436 MobiDBLite consensus disorder prediction 15 45 - -
Pral483g00012 436 MobiDBLite consensus disorder prediction 289 312 - -
Pral483g00012 436 MobiDBLite consensus disorder prediction 1 52 - -
Pral483g00012 436 SMART sant 328 392 IPR001005 -
Pral483g00012 436 SMART sant 42 104 IPR001005 -
Pral483g00012 436 Pfam Myb/SANT-like DNA-binding domain 330 420 IPR044822 -
Pral483g00012 436 Pfam Myb/SANT-like DNA-binding domain 45 128 IPR044822 -
Pral483g00012 436 ProSiteProfiles Myb-like domain profile. 38 102 IPR001005 -
Pral483g00012 436 MobiDBLite consensus disorder prediction 176 195 - -
Pral483g00012 436 MobiDBLite consensus disorder prediction 134 159 - -
Pral483g00012 436 CDD GT1 45 109 - -
Pral483g00012 436 MobiDBLite consensus disorder prediction 292 306 - -
Pral483g00012 436 FunFam Trihelix transcription factor GT-2 46 107 - -
Pral483g00012 436 CDD GT1 330 397 - -
Pral483g00012 436 PANTHER FI21293P1 19 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral483g00012 Pral-Chr483 126469 128253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral483g00012 43 422 Trihelix Transcription Factor Family AT1G76890 42.070 1.16e-98 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral483g00012 Myb_DNA-bind_4 8.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral483g00012 - - pcin:129299456 630.172