Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral483g00008 ATGAACAAAAGCATGCTTTTGGCTGCGAGTGGAAAGAATAGTGCTGACAGATCTCTTCTTATTGACCTTATGTTTTGGGTTTCCCAAAATCCTCCTCCCGCGCATTTGTTTCTAATTTCGAGTGATAAGGATTTTGCTGAAGTATTGCATCGTTTGAGAATGAGTAATTACAATATCCTAATTGCTGGTATGAAGACTTCTTCTCTTCTATGCAATGTAGGAACTATAGTGTGGCACTGGAATTCATTACTTAGAGGAAAAAATCTTGATGGAAAACATTTCAATCATCCTCCTGACGGTTTGTATGGTGGTCACAATGATGCACCTCTTGAAGACGCTTTCCCCGAGTTGCGCCCAATTCCAAAGGCAGTTGTGCGGCAGGTTCATCAGATATTGAGATTGTATCCAAATGGGGTCTCTTTATTATGTCTTAAAACAGAATTGGAAAGAACTGGTATCTCCTTGGATAAAGATTACTATGGATATAAAAGATTTTCCTATTTTATTTCATCAATTGTGCGTGTACATCTTCAGCTTGTACCTGGTAGAGGACTTATTGTACATCGCATCCCTGAAGAATCTCCTGAACCCACTAAAAGCAGTTTTGTACCATCAACAAAATTAGTTGAAAATGAGGAGTGGAATCATGTGCCTACTTCAACAGAGTTAGATGCTACTTCTGAAAAGTCAAATAATGATGACAAATATGCTATGCCAACAAAAAAGGAACCTGATGCAGCTTGTCACATTGGTGGAAGCATGGAAACTCACAACAATAGTTTTAGTAAACATCTAACTTTCTTGGGTTGGATCAAAAGTTGGTGGCCATTGAGGAAAAAGTTTGTAAACATGCATACTTCGACTGCTCGTGTGAATGAGATGGTTAGTAATGCTACAGAGCCCGAGTTATTGGGTTGGAAACAGACAGTTAGTCATGATGATAGTCATGATAAAGAGACTGAGATGTCAAATTTGAAACAGAGGGTTAGTCATTCAGAAGGGCTGCATTCGTTAAAACAGAGACAAATGGCTAGTCAATTTAAGGAGCCTGAGTTATCAGAACTGAGACAGACAGTGGATCATTCTGGAGAGCAGGATTTATTTCATTGCAGCTCCTTTTGGAAGGAAATGGAATCTTTTGTTTTCACCTCCAGAGGAGCAATTATTGTCTTCCACTCAAGAAGCAGGAAGGACATGGCGCTAAGTTTTAAAAAGTATGGACCCCATGTTCTCCACTCTCTCAGTGAAAGTGATCTCCTTCTATTGGTGGATTTGTTAATATCTGAGAAAAAATGGTTAGAGGAAAGGCCTTCTCAGACTTTTCCTTTCCGTGCCATTCCAAGCAGAACAACACAAAGTAAATTGCAAAAATCATCAGAATGTCAATTTGATAAAAACCAGAGTATTCCTCATGACGTGGTTTCTTCACCTGCCACTCAAAAAGGGCATGCTGAGAAGTCTACAACTGACATGTTAGCAGATGTTCAGAAACTTGTGAGTGAGATCTTGAGAGATCAATCAAATGGGTGCAATATGGGCCTGATACCAGATCGTTTTCTGGAGAAGTATGGCTATCATTTAGATTTTGGGAAACTTGGTTATTCTAAGTTATCCCACCTCATACGTAGCCTGCCTGGAGTGGAAACAGAGGATGCTTATTTCTTTCCTGCAAATCATGGCATACGTGCTTCTGGTAAGGAAACTTCAATTCTCAAAACCCAAGAGACAAAACCGAGTGATGTAGTGTACCACTACTCAGGGAATGAGTTCTGTGATTCAAACTCTGAAGATGATCAGCAAGACTCCACATGGGAGGAATTAGGACCTGCTACTGTCAGGGATTCCAACAAGAGTGACCTCGTATCAAAACCAAGGCAGAAAGCAATAGAGCTGAAGAGCGCAATAGATCTTGATTATGAGCCTGATCTCTCTGATGATGATTCTTTCGTATCTGGAGGAGATAACTCCTGTTTAACTCAATCAGAGTATGATCACTTCTCTGCTGCAAATAATGGCATATGTGCTTCTGGTGAGGAAACTTCAATTCTCAAAACTCAAGAGACAAAACTAGGTGATGTAGTGCACCACTATCCAGAGAATGAGTTATATGATTCATTCTCTGAAGATGACCGGAAAGACTCCCCATGGGAGGAATTAGGACCTGTTTGTGTCATCAATTCCAACGACAGTGACCTAGAATCAAAACCAAGGCAGAAAGCAATAGAGCTGAAGACGGCAATAGATCCTGATTATGAACATGATCTCTCTGATGATGATTCTTCCGAATCCGGTGGAGATAATTCCTGTTTAACTCAGTCAACCGGGGAAGGGGCGCCAAAACTTAACGGGAAAGATGGTTCTTTGCAAAATCTGGACTTAATGTATGGCAGTCAAGAAGGAGGCGATAGTGTGAATCCGAATGAAGCCAATACAGTAGGCAATGGTCTGACTGATGGTTTAAATCCATCAAGAATTTCCACTCCGGCTGCCAGTTCAGGAATTCATTCAGGGGGCAATAAGGAGGGGGACGAGCCTAAGAAAAACGGTTCATTTGATGCTGAACCAGTCTCACACAAGGATAAGGAGCTGATGCAAGAGATATTACGATGCTTGAAAAGGGCAAATGACTTGAAGATGCCAAATTGA 2646 0.4085 MNKSMLLAASGKNSADRSLLIDLMFWVSQNPPPAHLFLISSDKDFAEVLHRLRMSNYNILIAGMKTSSLLCNVGTIVWHWNSLLRGKNLDGKHFNHPPDGLYGGHNDAPLEDAFPELRPIPKAVVRQVHQILRLYPNGVSLLCLKTELERTGISLDKDYYGYKRFSYFISSIVRVHLQLVPGRGLIVHRIPEESPEPTKSSFVPSTKLVENEEWNHVPTSTELDATSEKSNNDDKYAMPTKKEPDAACHIGGSMETHNNSFSKHLTFLGWIKSWWPLRKKFVNMHTSTARVNEMVSNATEPELLGWKQTVSHDDSHDKETEMSNLKQRVSHSEGLHSLKQRQMASQFKEPELSELRQTVDHSGEQDLFHCSSFWKEMESFVFTSRGAIIVFHSRSRKDMALSFKKYGPHVLHSLSESDLLLLVDLLISEKKWLEERPSQTFPFRAIPSRTTQSKLQKSSECQFDKNQSIPHDVVSSPATQKGHAEKSTTDMLADVQKLVSEILRDQSNGCNMGLIPDRFLEKYGYHLDFGKLGYSKLSHLIRSLPGVETEDAYFFPANHGIRASGKETSILKTQETKPSDVVYHYSGNEFCDSNSEDDQQDSTWEELGPATVRDSNKSDLVSKPRQKAIELKSAIDLDYEPDLSDDDSFVSGGDNSCLTQSEYDHFSAANNGICASGEETSILKTQETKLGDVVHHYPENELYDSFSEDDRKDSPWEELGPVCVINSNDSDLESKPRQKAIELKTAIDPDYEHDLSDDDSSESGGDNSCLTQSTGEGAPKLNGKDGSLQNLDLMYGSQEGGDSVNPNEANTVGNGLTDGLNPSRISTPAASSGIHSGGNKEGDEPKKNGSFDAEPVSHKDKELMQEILRCLKRANDLKMPN 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral483g00008 881 ProSiteProfiles OST-type HTH domain profile. 491 565 IPR025605 -
Pral483g00008 881 MobiDBLite consensus disorder prediction 309 334 - -
Pral483g00008 881 MobiDBLite consensus disorder prediction 744 860 - -
Pral483g00008 881 MobiDBLite consensus disorder prediction 309 326 - -
Pral483g00008 881 MobiDBLite consensus disorder prediction 762 778 - -
Pral483g00008 881 CDD LOTUS 121 189 - -
Pral483g00008 881 Pfam NYN domain 9 73 IPR021139 GO:0004540
Pral483g00008 881 Gene3D - 491 552 IPR041966 -
Pral483g00008 881 MobiDBLite consensus disorder prediction 839 860 - -
Pral483g00008 881 PANTHER LIMKAIN B LKAP 12 501 IPR024768 GO:0005777|GO:0010468
Pral483g00008 881 ProSiteProfiles OST-type HTH domain profile. 120 191 IPR025605 -
Pral483g00008 881 CDD LOTUS 492 547 - -
Pral483g00008 881 Pfam OST-HTH/LOTUS domain 123 178 IPR025605 -
Pral483g00008 881 Pfam OST-HTH/LOTUS domain 492 550 IPR025605 -
Pral483g00008 881 MobiDBLite consensus disorder prediction 791 834 - -
Pral483g00008 881 Pfam OST-HTH Associated domain 394 451 IPR025677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral483g00008 Pral-Chr483 93627 97265 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral483g00008 7 86 C2H2 Transcription Factor Family AT5G61190 41.975 1.08e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral483g00008 - - pcin:129296579 947.962