Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral483g00004 ATGGATTTGGACGATTTCCGATCAGTATTGGAGACGGCTGGTGTGGATGTATGGATGTTCATCGACACTGCAATCGACGTGGCTTCCATTGATTATCACAACGAGTTAAAGCGTCGAAGGGATGGAATCGTTCAGCGTCTCTATGAAGCCACTTCAGCTCCTGGACGGTGTCGGAATTGCGAAGCGATTCGTCTTAAGTCCAATGGCCACGAAATAAGAGCTCCAATCGAGAAACAGAGCTCTCCTGAACTGAAAAGAGATGCTTCGCCTGTAACGCCGCACTCTATCGGCCAAGATGACGGCGATTTAGATCCTTACGGAGGCCTTTTTGATGACGAGGAAAAGAAGATTCAAGAGATCAAAGAGCAACTTGAGGATCAGGACCAGCCCGAAGATTATGTGGTGGAGTTGCTGCAGAATCTAGCGGACATGGATATTACTTTCCAAGCGCTAAAGGAGACTGATATTGGGAGGCACGTTAATCGGTTGCGCAAGCATCCATCCAATGATGTTCGGAGATTGGTGAAGCTACTTGTCAGGAAATGGAAGGAGATTGTAGACGAATGGGTGAAGCTAATGGAGATTCACCTATGCAGAGAAACGCCCAGAACGGGCACAATCAGATTCCTGATTTTGCATCCTCGCCTAATCCGCACTATTGGAGTTCTGGGTCAGACCGAAACTACTCAGAAGCTGAACCAAAACCAAAGACAGTTCCTCGAAGAGCGCCGCCAAAACCAGCAAACCCAGTGCCCATGCCTGCTTCTGCTCCTCAAAATAGAAAGAGAGAAGAGGGAGATAGCAATTTTGAAGCGGACAGACTTGCTTCGGCAAGAAGGCGGCTTCAAGAGAACTACAAAGAGGCTGAAAATGCCAAAAGACAAAGAACGATCCAAGTGA 900 0.4778 MDLDDFRSVLETAGVDVWMFIDTAIDVASIDYHNELKRRRDGIVQRLYEATSAPGRCRNCEAIRLKSNGHEIRAPIEKQSSPELKRDASPVTPHSIGQDDGDLDPYGGLFDDEEKKIQEIKEQLEDQDQPEDYVVELLQNLADMDITFQALKETDIGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEWVKLMEIHLCRETPRTGTIRFLILHPRLIRTIGVLGQTETTQKLNQNQRQFLEERRQNQQTQCPCLLLLLKIEREKREIAILKRTDLLRQEGGFKRTTKRLKMPKDKERSK 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral483g00004 299 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 114 191 IPR035441 -
Pral483g00004 299 Pfam TFIIS helical bundle-like domain 137 186 IPR017923 -
Pral483g00004 299 ProSiteProfiles TFIIS N-terminal domain profile. 112 189 IPR017923 -
Pral483g00004 299 CDD TFIIS_I 114 187 - -
Pral483g00004 299 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 111 195 IPR035441 -
Pral483g00004 299 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26C-RELATED 1 195 IPR044790 -
Pral483g00004 299 SMART TFS2_5 117 188 IPR003617 GO:0005634
Pral483g00004 299 MobiDBLite consensus disorder prediction 71 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral483g00004 Pral-Chr483 75756 78494 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pral483g00004 Med26 1.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral483g00004 - - qsa:O6P43_030378 282.722