Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00110 ATGATGGGATCTCAAGGGGAAGCAACCCAAGAGCCAAAAACACAATCTTTGGCTTACCAAGGATCCTCCCTATACAATCTGACTCTTGATGAAGTCCAGAACCAGCTTGGAAGTTTAGGGAAGCAACTAGGAGGCATGAACCTTGAAGAACTGCTCAGGAGTGTGGGAACTGCAGAAACTACCGGTCAACTAACTTCTGGGTCGTCTCTGAATCGACAAAACAGCATGACAATATCTGGGGACGTTAGAAATAAAACTGTTGATGAAGTCTGGAGAGATATACAACACAAGAAGAGCAATAACCAAGAGGGGAAATCTCAGGAAAGACAGCCAACACTAGGCGAGATGACTCTCGAGGATTTTCTTGTGAAGGCAGGAGTGATTTTTGATTCAAATGTTGCTCCTGAAAACAATATTTCGCAACAAGCTCATTGGATTCAATACCAGCTCTCTTCGCTTCATCAAAATCAAAATCACCATGATGTGATGGCAGGTTTAATGACTGGCCATGGAGTTCAACAACAGCATTTGCCAGCAGTAGCGAACCCAGTTTTGGATTCATCCTACTCTGAAAATATGGTGGCAGCAATCTCACCATCGTCTTTGATGCGTAAGTTATCAGACACACACAGTCCCGGAAGGAAGAGGGAGGCCTCTGATGGTGATGTGGTTGAGAAAACCATCGAGAGAAGGAAAAAGAGGATGATCAAAAATAGGGAATCTGCAGCTCGGTCACGAGCAAGAAAGCAGGCTTACACGCAGGAGCTGGAGATTAAAATTTCAAGTTTAGAAGAGGAGAATGAAAGGCTTAGAAGACAGTATGAAATGGAGAGAGTGTTGCCGTACGTTCCACCAGCTGAGGGTAAGCGCCAACTTCGCAGAACAAGTTCAGCTTCTTTTTGA 903 0.4452 MMGSQGEATQEPKTQSLAYQGSSLYNLTLDEVQNQLGSLGKQLGGMNLEELLRSVGTAETTGQLTSGSSLNRQNSMTISGDVRNKTVDEVWRDIQHKKSNNQEGKSQERQPTLGEMTLEDFLVKAGVIFDSNVAPENNISQQAHWIQYQLSSLHQNQNHHDVMAGLMTGHGVQQQHLPAVANPVLDSSYSENMVAAISPSSLMRKLSDTHSPGRKREASDGDVVEKTIERRKKRMIKNRESAARSRARKQAYTQELEIKISSLEEENERLRRQYEMERVLPYVPPAEGKRQLRRTSSASF 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00110 300 SMART brlzneu 226 298 IPR004827 GO:0003700|GO:0006355
Pral4838g00110 300 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 233 248 IPR004827 GO:0003700|GO:0006355
Pral4838g00110 300 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 228 275 IPR004827 GO:0003700|GO:0006355
Pral4838g00110 300 SUPERFAMILY Leucine zipper domain 230 276 IPR046347 GO:0003700|GO:0006355
Pral4838g00110 300 Pfam bZIP transcription factor 230 273 IPR004827 GO:0003700|GO:0006355
Pral4838g00110 300 CDD bZIP_plant_BZIP46 230 276 - -
Pral4838g00110 300 Gene3D - 228 280 - -
Pral4838g00110 300 MobiDBLite consensus disorder prediction 59 81 - -
Pral4838g00110 300 Coils Coil 246 280 - -
Pral4838g00110 300 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 228 280 - -
Pral4838g00110 300 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 19 299 IPR043452 GO:0003700|GO:0045893
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00110 Pral-Chr4838 689073 691501 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4838g00110 2 300 bZIP Transcription Factor Family AT3G56850 51.385 1.16e-92 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral4838g00110 bZIP_1 5.3e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00110 K14432 - gmx:100783666 323.939