Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00086 ATGGAACAAGAGCCGCTTCTGCCGACTGAGGATCTTCGCCGCACTCGCGGGAGTAATCCCATGCTCCGCTCCTCCACCTTACGCGCCACTTTCACCCTCCCCTTAACTCGCTACACCACCCGCCTGATCGCGGCGGAGCACCACCGGATTTTCCTCGGTGATTGTACGGAGAACCCAGCGGAGGACGACGATGACCGACCCCTCGAGGATAGCAGTTGCGCCTATTCGAGGCCCATTTTGGTTCTGGACCTTGTATGGAACCTGGCCTTCGTACTGGTCACTGCTGGTGTACTTCTTTCCACATTTGGCGAGCATCCGTCCACCCCTTTGAGGCTTTGGCTCTGTGGGTATGCCTTTGAGTGCCTTCTGCATATGGGTTTTGTGTGTTTTGAGTATCGTCGGAGGACTCGAGATTTTTACGGTGCTGAGCTTGGGCTTTCCTTTTGCCAGAGTTGGAACAGTGTGAAGAAGTTAGAGTCTATGAACACACTGGTGTCATCTATTTGGTGGGTCCTTGGGTTTTATTGGATTGTGGTGGGTGGCCAGCAACTTTTGCAAGACTGTCCTCGTATCTACTGGTTAACAGTGGTCTTTCTTGCCTTTGATGTGTTTTTTATCATCTTTTGCATTGGGATGGTGTGTATAGTTTTCTTTGCTCTCTTTTTTTTCATCCCGATAGTAGCATTAGCTTATGCTATGAGAATCAGAGAGGGTGCATCAGAAGAGGATATCAGGTCTCTTCCTAAGTATAAGTTTAGTCAGTCAAATTCATTGGTGATGGTTGACAACAGTAAGAAGCAAGTTTCTAAAGCAACTATGGGTGCAAGCAATAGCAATCTTGTCAGCGAATTATATCTCAACCCAGATGATTCTGAATGCTGCATATGCCTTTCTCCATACGTTGAAGGGGCAGAACTTTATCGCCTTCCCTGCACGCACCATTTTCATTGTGGATGCATCAGCAGATGGCTTCGGACAAAAGCAACCTGCCCTCTCTGCAAATTCAATATGCTTAGAAGTGATACATTGGTTTGA 1035 0.4783 MEQEPLLPTEDLRRTRGSNPMLRSSTLRATFTLPLTRYTTRLIAAEHHRIFLGDCTENPAEDDDDRPLEDSSCAYSRPILVLDLVWNLAFVLVTAGVLLSTFGEHPSTPLRLWLCGYAFECLLHMGFVCFEYRRRTRDFYGAELGLSFCQSWNSVKKLESMNTLVSSIWWVLGFYWIVVGGQQLLQDCPRIYWLTVVFLAFDVFFIIFCIGMVCIVFFALFFFIPIVALAYAMRIREGASEEDIRSLPKYKFSQSNSLVMVDNSKKQVSKATMGASNSNLVSELYLNPDDSECCICLSPYVEGAELYRLPCTHHFHCGCISRWLRTKATCPLCKFNMLRSDTLV 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00086 344 MobiDBLite consensus disorder prediction 1 20 - -
Pral4838g00086 344 Pfam Ring finger domain 292 334 IPR001841 -
Pral4838g00086 344 SUPERFAMILY RING/U-box 285 338 - -
Pral4838g00086 344 ProSiteProfiles Zinc finger RING-type profile. 293 334 IPR001841 -
Pral4838g00086 344 SMART ring_2 293 333 IPR001841 -
Pral4838g00086 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 340 IPR013083 -
Pral4838g00086 344 PANTHER TARGET OF ERK KINASE MPK-1 68 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00086 Pral-Chr4838 571889 575488 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4838g00086 15 341 C3H Transcription Factor Family AT1G68070 41.279 1.26e-86 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00086 - - pcin:129306192 664.455