Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00070 ATGTCAGATAGAGTATCCCTCGGCGATTCTGAGCACAGGAAGCTTATTAAGCGCAAGATGAGTGAGGAATCATCAGAGCCACCTTCCATGGAGGCCAACTCATCAGAGGGGCTACTGACTCTGAAGCTGATGGTGGGCGAACCCTCTTCATCATCAAAACCATCCGAGGATTGTAACAACGAAAAGATAGCAGAAAGAGCGGACGCCAGTAATAATAATCAGCAGCGAAAATTCTGTTGCAAGTTTTGCAGCAAGAAGTTCCATAGCTCTCAAGCTCTGGGTGGACACCAAAATGCTCACAGGCGTGAGCGTGTACTCAGCAAAATTGACAAAGAGCTTGACATGGGCACTTTTGGACGCTTTGGTCCTCACTTTTGCCCTTATTATTCAACCATGGCTGGTCTTCCCTTCACAGCGTCGCCTCCTTTTCATCCGGGGCTTCATCACCACATGAGCCCAGTGGCTCGTTATGGCTCGCAAGCGCCAGCCAACTCGGCCCTAGAGGCGTTCCGGTTCGGCTCAAGAAGCTCCTGGGCTGAAGAAGGAGCGGTTCAACGCAGAGCAAATCGCAGAAGCAATAATAATGTTCAGAGCTCTTCTTCACCTGCAAACACAAAGCCAGATGAATCAGGAGGCACTGGTGCAAGTGCAAATGTTGGAGGCTTCGAGAGGAACTCATATGTGGGAAGCATTCATGATACACCATCAGGCCTCGACTTGTCTCTCAGTCTTTAA 735 0.4966 MSDRVSLGDSEHRKLIKRKMSEESSEPPSMEANSSEGLLTLKLMVGEPSSSSKPSEDCNNEKIAERADASNNNQQRKFCCKFCSKKFHSSQALGGHQNAHRRERVLSKIDKELDMGTFGRFGPHFCPYYSTMAGLPFTASPPFHPGLHHHMSPVARYGSQAPANSALEAFRFGSRSSWAEEGAVQRRANRRSNNNVQSSSSPANTKPDESGGTGASANVGGFERNSYVGSIHDTPSGLDLSLSL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00070 244 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Pral4838g00070 244 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 23 244 IPR044246 GO:0009788
Pral4838g00070 244 SUPERFAMILY beta-beta-alpha zinc fingers 75 105 IPR036236 -
Pral4838g00070 244 Pfam C2H2-type zinc finger 78 103 - -
Pral4838g00070 244 ProSitePatterns Zinc finger C2H2 type domain signature. 79 100 IPR013087 -
Pral4838g00070 244 MobiDBLite consensus disorder prediction 1 60 - -
Pral4838g00070 244 MobiDBLite consensus disorder prediction 183 218 - -
Pral4838g00070 244 MobiDBLite consensus disorder prediction 188 212 - -
Pral4838g00070 244 MobiDBLite consensus disorder prediction 1 25 - -
Pral4838g00070 244 Gene3D Classic Zinc Finger 51 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00070 Pral-Chr4838 458243 458977 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4838g00070 76 150 C2H2 Transcription Factor Family AT1G24625 49.333 2.23e-14 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00070 - - pcin:129302275 288.5