Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00069 ATGGGTTTGGAGATTATGGTGCCCAACACGTGCATTAGGGGCTGCTGTTCCAGCTCTTCTATTCCTCTCCATGTTCCTCCTTCCTCTTATTCTCTTTTAGCTCCAATTGCCAAAGGGGCGGAGAGTCTTGTGTACGAAGGGACTTTAGATGGGAACAAGGTTGCTGTCAAGAAACCTATCCTGTCAACTACGGAAGATATCAACAAGTTCCACAAAGAATTACAGCTGTTATGCAAGTTAGATCACCCGGCGATAGCAACGCTAATTGCTGCTCATGCAAAGCCGCCCAATTACCTCTTTTTCTTCAAATTCTATGAATCTCTCAACCTTGCACAAAAGTTACACTTGGAAGAATGGACCCCGAGTGTCAGTTACGCACTTATGATAATAATTCAGTTAGCTAAAGCTTTGCAGTATCTTCATAACCTTGGGATACTACATAGAGATGTGAAACCAGCAAATATTCTTCTTGACGAAAATCTTTATCCACACCTCACAGATTTTGGTTTGGCAGAATACAAGAATGACCTTAAGAGAGTTTCTCTTGAAAATTGGAAGTCTTCTGGCAAGCCGACTGGTGGTTTTCATAAAAAAAATATGGTTGGAACTCTAATTTACATGGCACCTGAAATATTAAAGAAGGAGCTGCACACAGAAAAATCAGATGTCTACAGTTTTGGGGTGACGATCAACGAACTCCTTACAGGTGTTGTACCATATACTGATCTTCGTGCAGAAGCACAGGCTCACACAGTACTCGAGATGAACTATACAGAGCAGCAACTAACAGCAGCTGTTGTTTCTGATGGATTAAGGCCAGTCCTTGCTGCTCAGGAGTCGGGTGTACCTTCAAGATTATTAGCATTAATACAGAGATGCTGGGATGCAAAACCTGAAAATAGACCTTCCTTTGATGATATAGTTAAGGAGCTTGATTCCATCATTGAGCGCAGAAGGGACGGTGACGATGGACACCTCAGACCTTGTAAGTTGCGTGACAATCAGGTTGTAGACGGGAGCAATAATCACCTTCAGGCTTATCAAGAGAGCATTAATTGGTCTACCCTGGGAGAACTTCTCTCAAAGAGATCCTCCAGTGGAACTGATTCTAAATTGCGAACCTGGCATAGGGCTTTTGATGAGCCTTTGGCTCACTGTCCAACACTTTCTTGGGGATCTTATGCTACCTGTGCGAGAAGGGAGACCATGGAGGACACACATTTCATTCTTCCCAGCATGTGCAATGAAAAGGACGTACATGCTTTTGGCATCTTTGACGGCCATAGAGGTGCAGCAGCTGCTGAGTTTTCTGCTCAAGCCTTGCCAGGATTCCTGCAAGCTTTAGGTTCTATAGGAAGTCCAGCTACCACACTCGTTGAGGCATTCCTTAAAACAGATTATGCCTTCAGAGAAGAGCTTGATTCCTGTCGTAAATCCAGAAGAGTCACCCAGAAGGACTGGCATCCTGGCTGTACAGCGGTTGTCACTCTTGTAGTCAGAAACAAGCTTTTTGTTGCTAACAGTGGTGATTGCAGGACAATCTTATGCCGCGCTGGTTCTCCCATTGCTCTAAGCAAAGATCATGTGGCAAGCTGTCCTGAAGAGAGAGAGCGTGTTATTCGTAATGGAGGGCAAGTTCGCTGGCAAGTTGATACCTGGAGGGTTGGCCTTCCTGCACTCCAGGTTACACGTTCCATTGGGGATGACGATCTGAAGCCGGCTGTAACTGCAGAACCGGAGATAACTGAAACTACTCTATCCTCAGACGATGAATATTTGGTGATGGCGAGTGATGGACTGTGGGATGTGATGAGCAATAAAGAAGTTATAAGCATAATCAAAGATACAGTGAAAGAGCCAGGAATGTGCTCAAAGAGATTGGCTACCGAGGCAGTGGAACGAGGTAGCAAAGATAACATTACGGTCATTGTGGTTTTCTTGCGCCCTGTCTCTACAGCAGAGAGAATTTATTAG 1974 0.4468 MGLEIMVPNTCIRGCCSSSSIPLHVPPSSYSLLAPIAKGAESLVYEGTLDGNKVAVKKPILSTTEDINKFHKELQLLCKLDHPAIATLIAAHAKPPNYLFFFKFYESLNLAQKLHLEEWTPSVSYALMIIIQLAKALQYLHNLGILHRDVKPANILLDENLYPHLTDFGLAEYKNDLKRVSLENWKSSGKPTGGFHKKNMVGTLIYMAPEILKKELHTEKSDVYSFGVTINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLAAQESGVPSRLLALIQRCWDAKPENRPSFDDIVKELDSIIERRRDGDDGHLRPCKLRDNQVVDGSNNHLQAYQESINWSTLGELLSKRSSSGTDSKLRTWHRAFDEPLAHCPTLSWGSYATCARRETMEDTHFILPSMCNEKDVHAFGIFDGHRGAAAAEFSAQALPGFLQALGSIGSPATTLVEAFLKTDYAFREELDSCRKSRRVTQKDWHPGCTAVVTLVVRNKLFVANSGDCRTILCRAGSPIALSKDHVASCPEERERVIRNGGQVRWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITETTLSSDDEYLVMASDGLWDVMSNKEVISIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00069 657 CDD PP2Cc 392 647 IPR001932 -
Pral4838g00069 657 FunFam Protein kinase and PP2C-like domain-containing protein 20 346 - -
Pral4838g00069 657 SUPERFAMILY PP2C-like 385 649 IPR036457 -
Pral4838g00069 657 Gene3D Transferase(Phosphotransferase) domain 1 19 327 - -
Pral4838g00069 657 SUPERFAMILY Protein kinase-like (PK-like) 17 314 IPR011009 -
Pral4838g00069 657 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Pral4838g00069 657 SMART PP2C_SIG_2 405 647 IPR001932 -
Pral4838g00069 657 SMART PP2C_4 385 645 IPR001932 -
Pral4838g00069 657 Gene3D - 384 652 IPR036457 -
Pral4838g00069 657 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 317 - -
Pral4838g00069 657 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 382 651 - -
Pral4838g00069 657 Pfam Protein phosphatase 2C 395 640 IPR001932 -
Pral4838g00069 657 ProSiteProfiles Protein kinase domain profile. 30 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4838g00069 657 ProSiteProfiles PPM-type phosphatase domain profile. 390 647 IPR001932 -
Pral4838g00069 657 SMART serkin_6 30 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4838g00069 657 Pfam Protein kinase domain 32 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00069 Pral-Chr4838 449811 455383 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4838g00069 99 657 PP2C-type Phosphatase Gene Family AT2G40860 66.488 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Pral4838g00069 Pkinase 3.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00069 - - pcin:129322187 1209.51