Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00068 ATGGGTTTGGAGATTATGGTGCCCAACACGTGCATTAGGGGCTGCTGTTCCAGCTCTTCTATTCCTCTCCATGTTCCTCCTTCCTCTTATTCTCTTTTAGCTCCAATTGCCAAAGGGGCGGAGAGTCTTGTGTACGAAGGGACTTTAGATGGGAACAAGGTTGCTGTCAAGAAACCTATCCTGTCAACTACGGAAGATATCAACAAGTTCCACAAAGAATTACAGCTGTTATGGTCTCTCTCTCACGCAGCATCTTCTGTTTGTATAATCCTATTGGGGTCTTTGCATGTTTGCAAGTTAGATCACCCGGCGATAGCAACGCTAATTGCTGCTCATGCAAAGCCGCCCAATTACCTCTTTTTCTTCAAATTCTATGAATCTCTCAACCTTGCACAAAAGTTACACTTGGAAGAATGGACCCCGAGTGTCAGTTACGCACTTATGATAATAATTCAGTTAGCTAAAGCTTTGCAGTATCTTCATAACCTTGGGATACTACATAGAGATGTGAAACCAGCAAATATTCTTCTTGACGAAAATCTTTATCCACACCTCACAGATTTTGGTTTGGCAGAATACAAGAATGACCTTAAGAGAGTTTCTCTTGAAAATTGGAAGTCTTCTGGCAAGCCGACTGGTGGTTTTCATAAAAAAAATATGGTTGGAACTCTAATTTACATGGCACCTGAAATATTAAAGAAGGAGCTGCACACAGAAAAATCAGATGTCTACAGTTTTGGGGTGACGATCAACGAACTCCTTACAGGTGTTGTACCATATACTGATCTTCGTGCAGAAGCACAGGCTCACACAGTACTCGAGATGAACTATACAGAGCAGCAACTAACAGCAGCTGTTGTTTCTGATGGATTAAGGCCAGTCCTTGCTGCTCAGGAGTCGGGTGTACCTTCAAGATTATTAGCATTAATACAGAGATGCTGGGATGCAAAACCTGAAAATAGACCTTCCTTTGATGATATAGTTAAGGAGCTTGATTCCATCATTGAGCGCAGAAGGGACGGTGACGATGGACACCTCAGACCTTGTAAGTTGCGTGACAATCAGGTTGTAGACGGGAGCAATAATCACCTTCAGGCTTATCAAGAGAGCATTAATTGGTCTACCCTGGGAGAACTTCTCTCAAAGAGATCCTCCAGTGGAACTGATTCTAAATTGCGAACCTGGCATAGGGCTTTTGATGAGCCTTTGGCTCACTGTCCAACACTTTCTTGGGGATCTTATGCTACCTGTGCGAGAAGGGAGACCATGGAGGACACACATTTCATTCTTCCCAGCATGTGCAATGAAAAGGACGTACATGCTTTTGGCATCTTTGACGGCCATAGAGGTGCAGCAGCTGCTGAGTTTTCTGCTCAAGCCTTGCCAGGATTCCTGCAAGCTTTAGGTTCTATAGGAAGTCCAGCTACCACACTCGTTGAGGCATTCCTTAAAACAGATTATGCCTTCAGAGAAGAGCTTGATTCCTGTCGTAAATCCAGAAGAGTCACCCAGAAGGACTGGCATCCTGGCTGTACAGCGGTTGTCACTCTTGTAGTCAGAAACAAGCTTTTTGTTGCTAACAGTGGTGATTGCAGGACAATCTTATGCCGCGCTGGTTCTCCCATTGCTCTAAGCAAAGATCATGTGGCAAGCTGTCCTGAAGAGAGAGAGCGTGTTATTCGTAATGGAGGGCAAGTTCGCTGGCAAGTTGATACCTGGAGGGTTGGCCTTCCTGCACTCCAGGTTACACGTTCCATTGGGGATGACGATCTGAAGCCGGCTGTAACTGCAGAACCGGAGATAACTGAAACTACTCTATCCTCAGACGATGAATATTTGGTGATGGCGAGTGATGGACTGTGGGATGTGATGAGCAATAAAGAAGTTATAAGCATAATCAAAGATACAGTGAAAGAGCCAGGAATGTGCTCAAAGAGATTGGCTACCGAGGCAGTGGAACGAGGTAGCAAAGATAACATTACGGTCATTGTGGTTTTCTTGCGCCCTGTCTCTACAGCAGAGAGAATTTATTAG 2034 0.4464 MGLEIMVPNTCIRGCCSSSSIPLHVPPSSYSLLAPIAKGAESLVYEGTLDGNKVAVKKPILSTTEDINKFHKELQLLWSLSHAASSVCIILLGSLHVCKLDHPAIATLIAAHAKPPNYLFFFKFYESLNLAQKLHLEEWTPSVSYALMIIIQLAKALQYLHNLGILHRDVKPANILLDENLYPHLTDFGLAEYKNDLKRVSLENWKSSGKPTGGFHKKNMVGTLIYMAPEILKKELHTEKSDVYSFGVTINELLTGVVPYTDLRAEAQAHTVLEMNYTEQQLTAAVVSDGLRPVLAAQESGVPSRLLALIQRCWDAKPENRPSFDDIVKELDSIIERRRDGDDGHLRPCKLRDNQVVDGSNNHLQAYQESINWSTLGELLSKRSSSGTDSKLRTWHRAFDEPLAHCPTLSWGSYATCARRETMEDTHFILPSMCNEKDVHAFGIFDGHRGAAAAEFSAQALPGFLQALGSIGSPATTLVEAFLKTDYAFREELDSCRKSRRVTQKDWHPGCTAVVTLVVRNKLFVANSGDCRTILCRAGSPIALSKDHVASCPEERERVIRNGGQVRWQVDTWRVGLPALQVTRSIGDDDLKPAVTAEPEITETTLSSDDEYLVMASDGLWDVMSNKEVISIIKDTVKEPGMCSKRLATEAVERGSKDNITVIVVFLRPVSTAERIY 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00068 677 ProSiteProfiles Protein kinase domain profile. 30 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4838g00068 677 FunFam Protein kinase and PP2C-like domain-containing protein 20 366 - -
Pral4838g00068 677 Gene3D Phosphorylase Kinase; domain 1 19 125 - -
Pral4838g00068 677 CDD PP2Cc 412 667 IPR001932 -
Pral4838g00068 677 SMART PP2C_4 405 665 IPR001932 -
Pral4838g00068 677 Pfam Protein phosphatase 2C 415 660 IPR001932 -
Pral4838g00068 677 Gene3D Transferase(Phosphotransferase) domain 1 129 338 - -
Pral4838g00068 677 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 24 337 - -
Pral4838g00068 677 SUPERFAMILY PP2C-like 405 669 IPR036457 -
Pral4838g00068 677 Gene3D - 404 672 IPR036457 -
Pral4838g00068 677 SMART PP2C_SIG_2 425 667 IPR001932 -
Pral4838g00068 677 FunFam Leucine rich repeat protein phosphatase 2c domain containing protein 402 671 - -
Pral4838g00068 677 SMART serkin_6 30 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4838g00068 677 Pfam Protein kinase domain 99 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4838g00068 677 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Pral4838g00068 677 ProSiteProfiles PPM-type phosphatase domain profile. 410 667 IPR001932 -
Pral4838g00068 677 SUPERFAMILY Protein kinase-like (PK-like) 25 336 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00068 Pral-Chr4838 449811 455383 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4838g00068 119 677 PP2C-type Phosphatase Gene Family AT2G40860 66.488 0.0 785
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-3 Pral4838g00068 PP2C 1.3e-66 CL0238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00068 - - pcin:129322187 1197.57