LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4838g00061	ATGGAGCGAAACAAAATCCCCTGTCAACAAAACGAAATCACGCGGAAACATCGTCAATGTCCAAGACTTCCAAGTCTTGGTCGAAAGTTGAAAGTTGAAACTCTCCTTTGGTTCTTCATTTCTAAAACCCTCCCCATGACTGAGCCAACTCCATCCTCGGATTTGTGTTTCAGCGATTTATCATCCGAGTTGGATAACCTCCCTGCCCCGTCCATGGATCCCCTTTTTTTCTCCGACAACAATCACGCCATGCCTTCTGAAGCATTCGCATCGGACCTTGATTTGGCCATGGAATTCGGGAACGATGGGGATTTCGAGATTTCCTTCGATGATCTCGACAATCTCTATATTCCTCTAGAAGTCGATGATTTCCTGATACCCAATGACTCTGTGCAATCGCCTGCATTGCATGATGCCGACTTGAATGTCGATGATAAGCAGTTGAGCTACAACAGTACCCATTTTGAGTCACCGGACTCGGATACTTCAGGTTCGGGAAATCAGATTTCTAATGTTTCGCAGTTCCTGAATTCACAATCACCTGAGTCCGGTAGTTGCCACCGGGAGCTTTCTGTGGCACACTCGGCGGATACTTCTGGTGATCAGGACTCGCACCATTCACTGGATGGTAAGGTTTCGAGCTTTAAATTGCCAGATTCTGATTCTTGCGATCGGGAGTCTTCTGGTGGTCCCGTTTCATCTCACGGTTCAGGCAACGGTATAGTGATGAATTCACCTACACTGAGTTCTGACTGCGACGACAGAGACATTTCTTCTCTTGGGATTGCTGGTCAGAATAGAAGATTGGGGGAAATGGGCAAAATTTATGATTTGAAAAGGAAGAAGCAGCACAATGAAGGAAATACTGAGGCGAGAACGACGAAGTTTCGGAAGTCATCGATGCCTATGGATAATACCAGTCAGCAGTCTGATCTCAGTGCCCTCGACGAAGAGGACGACAAAAGGAAGGCTAGGCTGCTAAGGAATCGGGAGAGTGCCCAGCTCTCCAGACAGAGAAAGAAGCATTATGTGGAGGAGCTTGAGGAGAAGGTGAGGTCAATGCATTCTACCATAACTGATTTGAGTAGTAAGGTATCAGTTATTATGGCCGAGAATGCTACTTTGAGACAGCAATTGAGTGCTACTGGAATGTGCCTTCCGCCAGCTCCAGGGATGTATCCGCATCCCCCGATGGCACCCATGCCTTATCCATGGATGCCGTATGCACCCTATGCAGTCAAGCCGCAAGGTTCTCAGGTTCCTCTGGTTCCAATTCCCAGGTTAAAGTCTCAACAATCACAATCAGCTCCAAAGGCCAAGAAGTCCGAGAATAAGAAGCCTGAGGGAAGAACTAAGAAGGTTGCCAGCATTAGTTTCCTGGGTTTGTTTTTCTTCATATTTCTTTTTGGTGGACTTGTTCCTCTGGTCAATTATAATTTTGGAGATTTAGGGGACAATATTCCCGGTAGGTCCATCTCTATTGCTGATAGATTTTATAGTCAGCGCGGAGGAAAAGTTTGGGAGATAATTGGTTATAGGAATGGATCTGAAGGAGATAGGACAGTAGGATTCTCTAGTAGGAATTTGAGTATTTCTGATAGACTAATATATGAGAAAGGTCGCAAATTAGAAGAAACATATAAACAGCGGGATTCCCCATGTAGAACAGGCTCAGATGGCTCTGTTCATAAGGGCAATGCTAGCGAACCAGAGCCTCTTCTTGCTTCTCTGTACGTTCCACGGAATGATAAGCTTGTGAAGATTGATGGGAACTTGATAATCCACTCTGTTCTGGCTACTGAGAAAGCGAAGGCATCTCAAACTGTTCATTCAGAGAATAATAGGAGAGAAACTGGATTGGCGATTTCTAAAGATTGGGATTCTGCTCTGGCTATTCCTGAAGTTGGAAGAAACAGAGATTCACATCCTCACCTGTATAGGAGCCCGCCTGAACAGCGGAAGGCTCTTGCCTCTGGTTCAGCTGAGACTTTGAAGGACCATTTAAAGTCAACTGCGACTGATGGTAAAATGCAAAAGTGGTTCCATGAAGGCCTTGCTGGGCCAATGCTAAGTTCTGGGATGTGCTCAGAGGTTTTCCAGTTTGATGCCTCACCAACACCCGGAGCCATAGTTCCAGCATCGCCAGTCGCTAATGTTTCTGCAGTTAACCCCCAGAATGATACAAGCATCAACAAGAGCAGGAATAGAAGATTTCTTGATAGGCCTCCCAGTTCCCTTGCCAGATCCGATCGCAACCCCAGTAAAGAACATGGAAGAAATTCCCAGAATGAGGACCTCACTGGTAACAAGTCAATGTCTTCCATGGTGGTTTCGGTTCTTGTTGATCCCAAAGAGGTGGGAGATGGTGATGTGGATGGCATGATGCAACACAAGTCACTTTCTCGGATTTTTGTGGTTGTGCTTATAGACAGCGTCAAGCATGTGACTTACTCTTGCGGTCTCCCGCGCACACCTCTCCATCTCGTGACTGCGTGA	2496	0.4627	MERNKIPCQQNEITRKHRQCPRLPSLGRKLKVETLLWFFISKTLPMTEPTPSSDLCFSDLSSELDNLPAPSMDPLFFSDNNHAMPSEAFASDLDLAMEFGNDGDFEISFDDLDNLYIPLEVDDFLIPNDSVQSPALHDADLNVDDKQLSYNSTHFESPDSDTSGSGNQISNVSQFLNSQSPESGSCHRELSVAHSADTSGDQDSHHSLDGKVSSFKLPDSDSCDRESSGGPVSSHGSGNGIVMNSPTLSSDCDDRDISSLGIAGQNRRLGEMGKIYDLKRKKQHNEGNTEARTTKFRKSSMPMDNTSQQSDLSALDEEDDKRKARLLRNRESAQLSRQRKKHYVEELEEKVRSMHSTITDLSSKVSVIMAENATLRQQLSATGMCLPPAPGMYPHPPMAPMPYPWMPYAPYAVKPQGSQVPLVPIPRLKSQQSQSAPKAKKSENKKPEGRTKKVASISFLGLFFFIFLFGGLVPLVNYNFGDLGDNIPGRSISIADRFYSQRGGKVWEIIGYRNGSEGDRTVGFSSRNLSISDRLIYEKGRKLEETYKQRDSPCRTGSDGSVHKGNASEPEPLLASLYVPRNDKLVKIDGNLIIHSVLATEKAKASQTVHSENNRRETGLAISKDWDSALAIPEVGRNRDSHPHLYRSPPEQRKALASGSAETLKDHLKSTATDGKMQKWFHEGLAGPMLSSGMCSEVFQFDASPTPGAIVPASPVANVSAVNPQNDTSINKSRNRRFLDRPPSSLARSDRNPSKEHGRNSQNEDLTGNKSMSSMVVSVLVDPKEVGDGDVDGMMQHKSLSRIFVVVLIDSVKHVTYSCGLPRTPLHLVTA	831

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4838g00061	831	MobiDBLite	consensus disorder prediction	150	186	-	-
	Pral4838g00061	831	MobiDBLite	consensus disorder prediction	199	223	-	-
	Pral4838g00061	831	MobiDBLite	consensus disorder prediction	275	319	-	-
	Pral4838g00061	831	MobiDBLite	consensus disorder prediction	428	450	-	-
	Pral4838g00061	831	Gene3D	-	320	385	-	-
	Pral4838g00061	831	MobiDBLite	consensus disorder prediction	226	253	-	-
	Pral4838g00061	831	MobiDBLite	consensus disorder prediction	150	253	-	-
	Pral4838g00061	831	FunFam	bZIP transcription factor 49	320	382	-	-
	Pral4838g00061	831	CDD	bZIP_HY5-like	322	373	-	-
	Pral4838g00061	831	MobiDBLite	consensus disorder prediction	275	293	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4838g00061	Pral-Chr4838	399397	402583	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4838g00061	62	830	bZIP Transcription Factor Family	AT2G40950	46.863	2.02e-162	488

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Pral4838g00061		bZIP_1	5e-12	CL0018

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4838g00061	K25783		-	gmx:100127362	723.005

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