Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00054 ATGGCTTCGAGACCCATCGTTCCACCACAGGCCAGAGGTGATGCAGTCGTCGAGGGAGGTAAGCAGCAAAAGAAAAATCCAGCGGCAGAAGGAAGAAACCGCAGAGCACTGGGCGACATTGGAAATTTGGTGAACGTAAAAGGAGTAGAGGTCAAGCCTAACCGCCCTATCACAAGGAGTTTCTGTGCCCAACTACTTGCTAATGCCCAGGCAGCAGCTGCGGCTGACAACAACAAGAAACAAGCTTGTGCTAAGGTGGATGCACCTCTTCCGGTCGTTGATGGAGTCGTAGCTGCTAAGAGAGTCGCACCAAAGCCGGCTCAGAAGAAAGTCACCGTTAAACCAAAGCCCGAGGAAGTCATTGACATAAGCTCAGAAGAAGAGGTAGAGAAAGAGAAGTCTCCGAACAAGAAAAAGGAAGGAGATGCCAACTCTAAGAAGAAATCACGCACTCTTACTTCCGTACTCACTGCTCGAAGCAAGGCAGCATGTGGTCTGACTAAGAAGCCAAAGGAGCAGATTGTTGACATAGACGCAGCTGACACTGAAAATGAACTTGCTGCAGTTGAATATATAGATGAAATTTACAAGTTTTACAAGCTGGTCGAGCATGAGAACCGGCCTCACGATTACATGGACTCGCAACCTGAACTCAACGAGAGGATGAGAGCTATATTGGTGGATTGGCTGATAGATGTCCACAGAAAGTTCGAGCTCTCGCTTGAGACTCTTTATCTCACCACCAACATAATTGATCGCTTTCTTGCCACCAAGACCGTGCCAAGGAGAGAACTCCAATTGGTTGGCATCAGTGCCATGCTCATGGCATCCAAGTATGAAGAAATATGGCCACCTGAGGTTAATGACTTTGTTTGCCTCTCAGACAGAGCTTACACTCACGAACAGATATTAGTGATGGAGAAAACCATATTAAACAAGCTGGAATGGACTTTGACTGTGCCCACCACTTACGTTTTCCTTGTTCGTTTCATCAAGGCTTCCATTCCTGATGAGAAATTTGAAAACATGGTCTATTTTCTTTCTGAGTTGGGAGCCATGCATTATGCCACCATAATGTATTGCCCATCAATGGTTGCTGCCTCAGCAGTCTTAGCAGCTCGTTACACTCTAAACAAGAACCCCACTTGGAGCGACACCCTGAAGCTTCACACTGGATACTCAGAAGCACAACTAATGTAA 1200 0.4667 MASRPIVPPQARGDAVVEGGKQQKKNPAAEGRNRRALGDIGNLVNVKGVEVKPNRPITRSFCAQLLANAQAAAAADNNKKQACAKVDAPLPVVDGVVAAKRVAPKPAQKKVTVKPKPEEVIDISSEEEVEKEKSPNKKKEGDANSKKKSRTLTSVLTARSKAACGLTKKPKEQIVDIDAADTENELAAVEYIDEIYKFYKLVEHENRPHDYMDSQPELNERMRAILVDWLIDVHRKFELSLETLYLTTNIIDRFLATKTVPRRELQLVGISAMLMASKYEEIWPPEVNDFVCLSDRAYTHEQILVMEKTILNKLEWTLTVPTTYVFLVRFIKASIPDEKFENMVYFLSELGAMHYATIMYCPSMVAASAVLAARYTLNKNPTWSDTLKLHTGYSEAQLM 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00054 399 SUPERFAMILY Cyclin-like 320 399 IPR036915 -
Pral4838g00054 399 CDD CYCLIN_AtCycB-like_rpt1 171 316 - -
Pral4838g00054 399 Pfam Cyclin, C-terminal domain 321 399 IPR004367 -
Pral4838g00054 399 MobiDBLite consensus disorder prediction 1 34 - -
Pral4838g00054 399 SMART Cyclin_C_2 321 399 IPR004367 -
Pral4838g00054 399 MobiDBLite consensus disorder prediction 104 151 - -
Pral4838g00054 399 Gene3D - 208 319 - -
Pral4838g00054 399 PANTHER CYCLINS 138 383 IPR039361 -
Pral4838g00054 399 SUPERFAMILY Cyclin-like 183 318 IPR036915 -
Pral4838g00054 399 SMART cyclin_7 228 312 IPR013763 -
Pral4838g00054 399 SMART cyclin_7 325 399 IPR013763 -
Pral4838g00054 399 FunFam G2/mitotic-specific cyclin 207 319 - -
Pral4838g00054 399 MobiDBLite consensus disorder prediction 111 147 - -
Pral4838g00054 399 PIRSF Cyclin_A_B_D_E 2 399 IPR046965 GO:0016538|GO:0044772
Pral4838g00054 399 Gene3D - 194 398 - -
Pral4838g00054 399 Pfam Cyclin, N-terminal domain 194 318 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00054 Pral-Chr4838 372491 374861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4838g00054 1 399 Core Cell Cycle Gene Families AT3G11520 57.037 4.08e-147 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00054 K21777 - gmx:547920 578.17