Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00051 ATGAAGTCCCGGTCCTTAGATTACTGGAGGAGTTACTTTCGAACCGCGAACTCCGATATATTTGATATTATAGACCATGCGATCATGGTGGCCGCCTCTGATTGTCCAAAGGAGTTTCGATTGCGAAGAGATAGAATCGCGGAACGGTTGTTTTCTTGTCGGATGACTCGTTGTTTGGGTTGTGAGCGAGTGGAGTTGGCGGTGTCCGGTGTCGACCAGGAGTACGATGGAGGTTGCAAGAGTGGTTTTGATAGAGACGGAGCTGAGGTGGAAGCAGGTGCAAGTAAAGAGAGCAAGGCCCATAGTAGCAGAGATGACCGTGGAGACATGAACATGAATCACGTTAGCAATTTTAGCTACGGAGAAGCTGAAGCATTGACGGATGAGATTGAAGAAGAGTCTCAACTGGTTGGTGAGACTTTGAGAATCAAGGAAATTCTACATAACTGCGAAGAAGAGTCTGATTCGGAAATATTCGAGTCGTTGAGGAGGCTACAGCTGATGGAACTGACAGTGGATCTTCTAAAGGCGACTGAAATTGGAAAGGCTGTCAATCCTTTCCGGAAGCATGGATCAATGGAGATTCGTCAGCTTGCACGGACTCTTATTGATGGCTGGAAAGAAATGGTGGATGAGTGGGTCAATGCAACCACAACAAATGCAGGTTCTGAAGGTACCCCAGATTCAGTAAATCCATCTGTTGTTGATGAAGAGGAGGAGGAAGGCCTTCCATCACCTCCTATGGATGAAGGGGCTTTCTTTGCAGCTCAAACTGCATCAATGGAGTTATCACAGTTCTTTGATGGCATGGATGATGATGGAAATCCTCGACAGAGTGGGGAATTCATCAAGAACCGGGAAAATGGCAGAAGACCAGCTCTGGACAATCAAAACATAGTAAAGAGGAAACCGCAGGCTTCTGATGGGGCGGAAGCCATGGTCAGAGATAGCAGGAATCAGCAAGCAAAGAAAAACGAGGCTGTTGCGAAGCTAAATAAATCAGCAACTGTTGGTTCTGGTCCTGGCAGACCATTAAAATCTAGCATGCAACGAAGAGAGAATATGGAGCCAAGGATGTTGCAAAAGATGGACAGGAGTGGAGTCCCCAAGAGGCCACTTGCTGGTCCGCAAGATAAGTCGAAGTGTGCAGATGATACTTCAGTCCAAATGAAGCTAGAAGCTACCAAGAGGAAACTTCAGGAGAGTTATCAACAAGCCGAAATTGCCAAGAAGCAGCGAACAATCCAGGTTATGGAGTTGCATGATCTCCCCAAGCAAGGAGGGATTGGCCACAGAGCTACACATTTCAAACCTATGAAGCACCAAAACAGGAATTGGGCCCAGGGACGAAGGTAG 1356 0.4705 MKSRSLDYWRSYFRTANSDIFDIIDHAIMVAASDCPKEFRLRRDRIAERLFSCRMTRCLGCERVELAVSGVDQEYDGGCKSGFDRDGAEVEAGASKESKAHSSRDDRGDMNMNHVSNFSYGEAEALTDEIEEESQLVGETLRIKEILHNCEEESDSEIFESLRRLQLMELTVDLLKATEIGKAVNPFRKHGSMEIRQLARTLIDGWKEMVDEWVNATTTNAGSEGTPDSVNPSVVDEEEEEGLPSPPMDEGAFFAAQTASMELSQFFDGMDDDGNPRQSGEFIKNRENGRRPALDNQNIVKRKPQASDGAEAMVRDSRNQQAKKNEAVAKLNKSATVGSGPGRPLKSSMQRRENMEPRMLQKMDRSGVPKRPLAGPQDKSKCADDTSVQMKLEATKRKLQESYQQAEIAKKQRTIQVMELHDLPKQGGIGHRATHFKPMKHQNRNWAQGRR 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00051 451 MobiDBLite consensus disorder prediction 90 114 - -
Pral4838g00051 451 CDD TFIIS_I 139 211 - -
Pral4838g00051 451 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 26A-RELATED 3 437 IPR044805 -
Pral4838g00051 451 MobiDBLite consensus disorder prediction 266 386 - -
Pral4838g00051 451 MobiDBLite consensus disorder prediction 90 111 - -
Pral4838g00051 451 ProSiteProfiles TFIIS N-terminal domain profile. 138 213 IPR017923 -
Pral4838g00051 451 MobiDBLite consensus disorder prediction 274 291 - -
Pral4838g00051 451 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 129 224 IPR035441 -
Pral4838g00051 451 MobiDBLite consensus disorder prediction 422 451 - -
Pral4838g00051 451 MobiDBLite consensus disorder prediction 434 451 - -
Pral4838g00051 451 MobiDBLite consensus disorder prediction 349 365 - -
Pral4838g00051 451 Pfam TFIIS helical bundle-like domain 162 210 IPR017923 -
Pral4838g00051 451 SMART TFS2_5 137 212 IPR003617 GO:0005634
Pral4838g00051 451 MobiDBLite consensus disorder prediction 218 251 - -
Pral4838g00051 451 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 136 224 IPR035441 -
Pral4838g00051 451 Coils Coil 389 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00051 Pral-Chr4838 348347 352080 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Pral4838g00051 Med26 3.3e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00051 - - zju:107431544 630.172