Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00049 ATGGCGTCGAGCTCAATGTCATCCACTGGTTCATGGAGTGCCCAGGAGAACAAAGCCTTCGAAAGGGCTCTTGCAGTTTATGACAAGGACACTCCTGATCGTTGGTACAATGTTGCCAGGGCTGTCGGTGGAAAATCACCAGAAGAGGTGAAGAGGCACTATGAGATGCTGGTCCGGGACATTCAGCATATAGAATCTGGGAGAGTGCCCTTCCCCAATTACAAGAAAAGTGTGGGCTTTGATGACCAAAAAAGGCTGAAAAACCTGCAGCTCCGGTGA 279 0.4982 MASSSMSSTGSWSAQENKAFERALAVYDKDTPDRWYNVARAVGGKSPEEVKRHYEMLVRDIQHIESGRVPFPNYKKSVGFDDQKRLKNLQLR 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00049 92 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 83 IPR044636 GO:0003700
Pral4838g00049 92 CDD SANT 14 58 IPR001005 -
Pral4838g00049 92 ProSiteProfiles SANT domain profile. 7 62 IPR017884 -
Pral4838g00049 92 ProSiteProfiles Myb-like domain profile. 4 58 IPR001005 -
Pral4838g00049 92 Pfam Myb-like DNA-binding domain 9 57 IPR001005 -
Pral4838g00049 92 SUPERFAMILY Homeodomain-like 5 60 IPR009057 -
Pral4838g00049 92 Gene3D - 2 71 - -
Pral4838g00049 92 SMART sant 8 60 IPR001005 -
Pral4838g00049 92 FunFam Transcription factor SRM1 4 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00049 Pral-Chr4838 336295 337046 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral4838g00049 Myb_DNA-binding 5.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00049 - - gmx:100818368 146.362