Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4838g00048 ATGGATTATTGTAACATATTCATCAATATAAGATATTCATTCGCAAGCAAGGAAATCCCGACCATTAAGGTGGTAGGCTGGCTCGTGAAGTCGGGCATAAGGGTCGTGGTTTACAGTGGAGACCAGGATGCAAACCTTCCATTCATAGGAACTCGACGTTTGGTGAGGAAATTAGCTGAAGAATTGAAACTCAAAGTGACAGTGGACTACACACCCTGGTTTGTGGATGGAAACCTACAGGTTGGAGGGTGGACAGAAGAGTATGGGAAATGGTTATCTTATGTAGTGATAATGGGGGCTTCCCATGAAGCCCCGGCCACTCAACCAAAGAGGACATTTATGCTGTTTGATGCCTTCCTTCAAGGAAAACTACTTCCTATCCCCCAACAATGA 393 0.4478 MDYCNIFINIRYSFASKEIPTIKVVGWLVKSGIRVVVYSGDQDANLPFIGTRRLVRKLAEELKLKVTVDYTPWFVDGNLQVGGWTEEYGKWLSYVVIMGASHEAPATQPKRTFMLFDAFLQGKLLPIPQQ 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4838g00048 130 Pfam Serine carboxypeptidase 13 122 IPR001563 GO:0004185|GO:0006508
Pral4838g00048 130 SUPERFAMILY alpha/beta-Hydrolases 6 125 IPR029058 -
Pral4838g00048 130 Gene3D alpha/beta hydrolase 1 125 IPR029058 -
Pral4838g00048 130 ProSitePatterns Serine carboxypeptidases, histidine active site. 92 109 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4838g00048 Pral-Chr4838 329443 330262 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4838g00048 31 125 Calmodulin-binding Proteins AT2G22960 31.579 1.09e-12 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4838g00048 K16297 - gmx:100819443 152.91